Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGCLP35914 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HMGCLP35914 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCLP35914 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGCLP35914 RNA5SP413-201ENST00000516373 109 ntBASIC19.93■□□□□ 0.78
HMGCLP35914 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGCLP35914 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGCLP35914 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGCLP35914 AC006557.6-201ENST00000623071 864 ntBASIC19.93■□□□□ 0.78
HMGCLP35914 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCLP35914 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 AL691432.2-201ENST00000607222 2038 ntBASIC19.93■□□□□ 0.78
HMGCLP35914 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
HMGCLP35914 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 AC112907.3-201ENST00000577781 2400 ntBASIC19.93■□□□□ 0.78
HMGCLP35914 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HMGCLP35914 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLP35914 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HMGCLP35914 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HMGCLP35914 TCF3P1-201ENST00000423021 1937 ntBASIC19.92■□□□□ 0.78
HMGCLP35914 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HMGCLP35914 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.92■□□□□ 0.78
HMGCLP35914 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCLP35914 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
HMGCLP35914 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 AC073130.3-201ENST00000624389 2278 ntBASIC19.92■□□□□ 0.78
HMGCLP35914 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
HMGCLP35914 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCLP35914 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLP35914 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.92■□□□□ 0.78
HMGCLP35914 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCLP35914 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLP35914 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLP35914 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLP35914 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
HMGCLP35914 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLP35914 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLP35914 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCLP35914 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCLP35914 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCLP35914 UNC93B4-201ENST00000505679 747 ntBASIC19.91■□□□□ 0.78
HMGCLP35914 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLP35914 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLP35914 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HMGCLP35914 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGCLP35914 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGCLP35914 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCLP35914 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGCLP35914 SLC25A24-204ENST00000569674 2357 ntBASIC19.91■□□□□ 0.78
HMGCLP35914 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMGCLP35914 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCLP35914 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLP35914 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCLP35914 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLP35914 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCLP35914 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLP35914 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLP35914 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLP35914 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLP35914 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.9■□□□□ 0.78
HMGCLP35914 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.9■□□□□ 0.78
HMGCLP35914 SOX15-203ENST00000570788 1093 ntBASIC19.9■□□□□ 0.78
HMGCLP35914 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.9■□□□□ 0.78
HMGCLP35914 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.9■□□□□ 0.78
HMGCLP35914 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HMGCLP35914 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLP35914 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLP35914 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGCLP35914 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCLP35914 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HMGCLP35914 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
HMGCLP35914 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HMGCLP35914 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
HMGCLP35914 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLP35914 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HMGCLP35914 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLP35914 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLP35914 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLP35914 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLP35914 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLP35914 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLP35914 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
HMGCLP35914 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms