Protein–RNA interactions for Protein: P33298

RPT3, 26S proteasome regulatory subunit 6B homolog, yeastyeast

Known RBP Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT3P33298 YOR314W-AYOR314W-A 111 nt1.33□□□□□ -2.2
RPT3P33298 YBR200W-AYBR200W-A 165 nt1.33□□□□□ -2.2
RPT3P33298 KAP120YPL125W 3099 nt1.33□□□□□ -2.2
RPT3P33298 snR85snR85 171 nt1.32□□□□□ -2.2
RPT3P33298 YFR012W-AYFR012W-A 87 nt1.32□□□□□ -2.2
RPT3P33298 YOR161W-AYOR161W-A 81 nt1.32□□□□□ -2.2
RPT3P33298 BFR2YDR299W 1605 nt1.31□□□□□ -2.2
RPT3P33298 CMC4YMR194C-B 222 nt1.31□□□□□ -2.2
RPT3P33298 tL(UAA)QtL(UAA)Q 85 nt1.3□□□□□ -2.2
RPT3P33298 COX5BYIL111W 456 nt1.29□□□□□ -2.2
RPT3P33298 BEM2YER155C 6504 nt1.29□□□□□ -2.2
RPT3P33298 NOP9YJL010C 2001 nt1.28□□□□□ -2.2
RPT3P33298 YKL100W-AYKL100W-A 90 nt1.28□□□□□ -2.2
RPT3P33298 YLR282CYLR282C 342 nt1.28□□□□□ -2.2
RPT3P33298 NST1YNL091W 3723 nt1.27□□□□□ -2.21
RPT3P33298 WAR1YML076C 2835 nt1.27□□□□□ -2.21
RPT3P33298 YGL182CYGL182C 324 nt1.27□□□□□ -2.21
RPT3P33298 YCL001W-BYCL001W-B 255 nt1.27□□□□□ -2.21
RPT3P33298 SMC1YFL008W 3678 nt1.27□□□□□ -2.21
RPT3P33298 ASE1YOR058C 2658 nt1.26□□□□□ -2.21
RPT3P33298 UTP8YGR128C 2142 nt1.25□□□□□ -2.21
RPT3P33298 YBL039C-AYBL039C-A 84 nt1.25□□□□□ -2.21
RPT3P33298 PRP16YKR086W 3216 nt1.23□□□□□ -2.21
RPT3P33298 CHS6YJL099W 2241 nt1.23□□□□□ -2.21
RPT3P33298 YML002WYML002W 2214 nt1.23□□□□□ -2.21
RPT3P33298 FIG2YCR089W 4830 nt1.22□□□□□ -2.21
RPT3P33298 YLR041WYLR041W 321 nt1.22□□□□□ -2.21
RPT3P33298 GEA2YEL022W 4380 nt1.22□□□□□ -2.21
RPT3P33298 YDL073WYDL073W 2955 nt1.21□□□□□ -2.22
RPT3P33298 snR190snR190 190 nt1.21□□□□□ -2.22
RPT3P33298 TAH1YCR060W 336 nt1.2□□□□□ -2.22
RPT3P33298 RPL26BYGR034W 384 nt1.2□□□□□ -2.22
RPT3P33298 PAU12YGR294W 363 nt1.19□□□□□ -2.22
RPT3P33298 FYV10YIL097W 1551 nt1.19□□□□□ -2.22
RPT3P33298 YOR329W-AYOR329W-A 210 nt1.19□□□□□ -2.22
RPT3P33298 PAU24YBR301W 363 nt1.19□□□□□ -2.22
RPT3P33298 YNL284C-BYNL284C-B 5268 nt1.17□□□□□ -2.22
RPT3P33298 RAD9YDR217C 3930 nt1.16□□□□□ -2.22
RPT3P33298 YIL071W-AYIL071W-A 477 nt1.16□□□□□ -2.22
RPT3P33298 OST4YDL232W 111 nt1.15□□□□□ -2.23
RPT3P33298 QCR9YGR183C 201 nt1.14□□□□□ -2.23
RPT3P33298 YNL067W-BYNL067W-B 141 nt1.14□□□□□ -2.23
RPT3P33298 snR39BsnR39B 96 nt1.14□□□□□ -2.23
RPT3P33298 YLR232WYLR232W 348 nt1.13□□□□□ -2.23
RPT3P33298 YCR095W-AYCR095W-A 159 nt1.12□□□□□ -2.23
RPT3P33298 YBR099CYBR099C 384 nt1.11□□□□□ -2.23
RPT3P33298 SEC8YPR055W 3198 nt1.1□□□□□ -2.23
RPT3P33298 SOM1YEL059C-A 225 nt1.1□□□□□ -2.23
RPT3P33298 SPT7YBR081C 3999 nt1.09□□□□□ -2.23
RPT3P33298 YDR544CYDR544C 429 nt1.09□□□□□ -2.23
RPT3P33298 YHR131W-AYHR131W-A 246 nt1.09□□□□□ -2.23
RPT3P33298 YJR029WYJR029W 5268 nt1.07□□□□□ -2.24
RPT3P33298 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
RPT3P33298 tM(CAU)Q2tM(CAU)Q2 78 nt1.07□□□□□ -2.24
RPT3P33298 YPR160W-AYPR160W-A 81 nt1.07□□□□□ -2.24
RPT3P33298 BUD3YCL014W 4911 nt1.07□□□□□ -2.24
RPT3P33298 COG6YNL041C 2520 nt1.07□□□□□ -2.24
RPT3P33298 tF(GAA)BtF(GAA)B 73 nt1.06□□□□□ -2.24
RPT3P33298 tF(GAA)FtF(GAA)F 73 nt1.06□□□□□ -2.24
RPT3P33298 tF(GAA)GtF(GAA)G 73 nt1.06□□□□□ -2.24
RPT3P33298 tF(GAA)H1tF(GAA)H1 73 nt1.06□□□□□ -2.24
RPT3P33298 tF(GAA)H2tF(GAA)H2 73 nt1.06□□□□□ -2.24
RPT3P33298 tF(GAA)MtF(GAA)M 73 nt1.06□□□□□ -2.24
RPT3P33298 tF(GAA)P1tF(GAA)P1 73 nt1.06□□□□□ -2.24
RPT3P33298 tF(GAA)P2tF(GAA)P2 73 nt1.06□□□□□ -2.24
RPT3P33298 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
RPT3P33298 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
RPT3P33298 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
RPT3P33298 EMT4tM(CAU)M 73 nt1.06□□□□□ -2.24
RPT3P33298 EMT2tM(CAU)O2 73 nt1.06□□□□□ -2.24
RPT3P33298 tN(GUU)QtN(GUU)Q 71 nt1.06□□□□□ -2.24
RPT3P33298 YLR399W-AYLR399W-A 105 nt1.05□□□□□ -2.24
RPT3P33298 RPM2YML091C 3609 nt1.05□□□□□ -2.24
RPT3P33298 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
RPT3P33298 SCC2YDR180W 4482 nt1.04□□□□□ -2.24
RPT3P33298 PMP2YEL017C-A 132 nt1.04□□□□□ -2.24
RPT3P33298 YDR210WYDR210W 228 nt1.03□□□□□ -2.24
RPT3P33298 YIL142C-AYIL142C-A 333 nt1.03□□□□□ -2.24
RPT3P33298 YNL103W-AYNL103W-A 90 nt1.02□□□□□ -2.25
RPT3P33298 SEC1YDR164C 2175 nt1.01□□□□□ -2.25
RPT3P33298 RKR1YMR247C 4689 nt1□□□□□ -2.25
RPT3P33298 TFB5YDR079C-A 219 nt1□□□□□ -2.25
RPT3P33298 YDR524C-AYDR524C-A 120 nt1□□□□□ -2.25
RPT3P33298 YBL109WYBL109W 336 nt1□□□□□ -2.25
RPT3P33298 YJL127W-AYJL127W-A 117 nt0.99□□□□□ -2.25
RPT3P33298 YPR117WYPR117W 7470 nt0.98□□□□□ -2.25
RPT3P33298 YSP1YHR155W 3687 nt0.97□□□□□ -2.25
RPT3P33298 YGR146C-AYGR146C-A 162 nt0.97□□□□□ -2.25
RPT3P33298 snR61snR61 90 nt0.96□□□□□ -2.26
RPT3P33298 YBR178WYBR178W 375 nt0.96□□□□□ -2.26
RPT3P33298 BEM3YPL115C 3387 nt0.96□□□□□ -2.26
RPT3P33298 RCO1YMR075W 2055 nt0.96□□□□□ -2.26
RPT3P33298 DOP1YDR141C 5097 nt0.93□□□□□ -2.26
RPT3P33298 BIR1YJR089W 2865 nt0.93□□□□□ -2.26
RPT3P33298 YMR326CYMR326C 309 nt0.93□□□□□ -2.26
RPT3P33298 UBP3YER151C 2739 nt0.92□□□□□ -2.26
RPT3P33298 ULP2YIL031W 3105 nt0.91□□□□□ -2.26
RPT3P33298 YBR072C-AYBR072C-A 162 nt0.91□□□□□ -2.26
RPT3P33298 GLG1YKR058W 1851 nt0.9□□□□□ -2.27
RPT3P33298 NNF2YGR089W 2811 nt0.89□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms