Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40LGP29965 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40LGP29965 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.68■□□□□ 0.42
CD40LGP29965 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.68■□□□□ 0.42
CD40LGP29965 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.68■□□□□ 0.42
CD40LGP29965 AL117332.1-201ENST00000622628 974 ntBASIC17.68■□□□□ 0.42
CD40LGP29965 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CD40LGP29965 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD40LGP29965 NOC2LP2-201ENST00000407594 1944 ntBASIC17.68■□□□□ 0.42
CD40LGP29965 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.68■□□□□ 0.42
CD40LGP29965 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.68■□□□□ 0.42
CD40LGP29965 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 BX005040.4-201ENST00000637145 1518 ntBASIC17.67■□□□□ 0.42
CD40LGP29965 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CD40LGP29965 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CD40LGP29965 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.67■□□□□ 0.42
CD40LGP29965 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.67■□□□□ 0.42
CD40LGP29965 MIR3621-201ENST00000580529 85 ntBASIC17.67■□□□□ 0.42
CD40LGP29965 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.67■□□□□ 0.42
CD40LGP29965 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.67■□□□□ 0.42
CD40LGP29965 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 AL691432.2-201ENST00000607222 2038 ntBASIC17.67■□□□□ 0.42
CD40LGP29965 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD40LGP29965 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CD40LGP29965 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.66■□□□□ 0.42
CD40LGP29965 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.66■□□□□ 0.42
CD40LGP29965 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CD40LGP29965 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40LGP29965 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40LGP29965 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CD40LGP29965 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40LGP29965 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.66■□□□□ 0.42
CD40LGP29965 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CD40LGP29965 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.66■□□□□ 0.42
CD40LGP29965 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.66■□□□□ 0.42
CD40LGP29965 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD40LGP29965 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CD40LGP29965 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CD40LGP29965 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CD40LGP29965 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40LGP29965 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.66■□□□□ 0.42
CD40LGP29965 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40LGP29965 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40LGP29965 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD40LGP29965 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CD40LGP29965 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD40LGP29965 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.66■□□□□ 0.42
CD40LGP29965 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40LGP29965 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40LGP29965 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CD40LGP29965 AC010141.3-201ENST00000456659 717 ntBASIC17.65■□□□□ 0.42
CD40LGP29965 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40LGP29965 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40LGP29965 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40LGP29965 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40LGP29965 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.65■□□□□ 0.42
CD40LGP29965 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.65■□□□□ 0.42
CD40LGP29965 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40LGP29965 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.65■□□□□ 0.42
CD40LGP29965 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD40LGP29965 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CD40LGP29965 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.64■□□□□ 0.42
CD40LGP29965 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.64■□□□□ 0.42
CD40LGP29965 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CD40LGP29965 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.64■□□□□ 0.42
CD40LGP29965 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CD40LGP29965 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.64■□□□□ 0.41
CD40LGP29965 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD40LGP29965 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD40LGP29965 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.64■□□□□ 0.41
CD40LGP29965 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.64■□□□□ 0.41
CD40LGP29965 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CD40LGP29965 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CD40LGP29965 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD40LGP29965 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms