Protein–RNA interactions for Protein: P29373

CRABP2, Cellular retinoic acid-binding protein 2, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRABP2P29373 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.9■□□□□ 0.78
CRABP2P29373 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.9■□□□□ 0.78
CRABP2P29373 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.9■□□□□ 0.78
CRABP2P29373 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.9■□□□□ 0.78
CRABP2P29373 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.9■□□□□ 0.78
CRABP2P29373 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.9■□□□□ 0.78
CRABP2P29373 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CRABP2P29373 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRABP2P29373 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.78
CRABP2P29373 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CRABP2P29373 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CRABP2P29373 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.89■□□□□ 0.77
CRABP2P29373 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.89■□□□□ 0.77
CRABP2P29373 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CRABP2P29373 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
CRABP2P29373 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CRABP2P29373 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.89■□□□□ 0.77
CRABP2P29373 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CRABP2P29373 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.89■□□□□ 0.77
CRABP2P29373 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CRABP2P29373 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.89■□□□□ 0.77
CRABP2P29373 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
CRABP2P29373 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.89■□□□□ 0.77
CRABP2P29373 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.89■□□□□ 0.77
CRABP2P29373 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.89■□□□□ 0.77
CRABP2P29373 AC016405.3-201ENST00000607710 860 ntBASIC19.89■□□□□ 0.77
CRABP2P29373 MIR6821-201ENST00000617625 74 ntBASIC19.89■□□□□ 0.77
CRABP2P29373 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CRABP2P29373 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.88■□□□□ 0.77
CRABP2P29373 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.88■□□□□ 0.77
CRABP2P29373 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CRABP2P29373 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.88■□□□□ 0.77
CRABP2P29373 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.88■□□□□ 0.77
CRABP2P29373 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CRABP2P29373 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.88■□□□□ 0.77
CRABP2P29373 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.88■□□□□ 0.77
CRABP2P29373 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.88■□□□□ 0.77
CRABP2P29373 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.88■□□□□ 0.77
CRABP2P29373 AC100791.3-201ENST00000617619 330 ntBASIC19.88■□□□□ 0.77
CRABP2P29373 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CRABP2P29373 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.88■□□□□ 0.77
CRABP2P29373 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.88■□□□□ 0.77
CRABP2P29373 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRABP2P29373 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CRABP2P29373 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CRABP2P29373 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CRABP2P29373 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CRABP2P29373 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.87■□□□□ 0.77
CRABP2P29373 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.87■□□□□ 0.77
CRABP2P29373 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 AC137761.2-201ENST00000561729 223 ntBASIC19.87■□□□□ 0.77
CRABP2P29373 AC145350.3-201ENST00000569033 163 ntBASIC19.87■□□□□ 0.77
CRABP2P29373 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CRABP2P29373 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.87■□□□□ 0.77
CRABP2P29373 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CRABP2P29373 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRABP2P29373 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms