Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.42■□□□□ 0.7
EPHA3P29320 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EPHA3P29320 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
EPHA3P29320 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHA3P29320 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.41■□□□□ 0.7
EPHA3P29320 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHA3P29320 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHA3P29320 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.41■□□□□ 0.7
EPHA3P29320 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.41■□□□□ 0.7
EPHA3P29320 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.41■□□□□ 0.7
EPHA3P29320 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.41■□□□□ 0.7
EPHA3P29320 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EPHA3P29320 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHA3P29320 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
EPHA3P29320 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EPHA3P29320 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.41■□□□□ 0.7
EPHA3P29320 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
EPHA3P29320 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHA3P29320 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 AC120498.9-201ENST00000339021 3867 ntBASIC19.4■□□□□ 0.7
EPHA3P29320 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.4■□□□□ 0.7
EPHA3P29320 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHA3P29320 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHA3P29320 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.4■□□□□ 0.7
EPHA3P29320 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.4■□□□□ 0.7
EPHA3P29320 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHA3P29320 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.4■□□□□ 0.7
EPHA3P29320 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHA3P29320 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.4■□□□□ 0.7
EPHA3P29320 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.4■□□□□ 0.7
EPHA3P29320 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHA3P29320 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
EPHA3P29320 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EPHA3P29320 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EPHA3P29320 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
EPHA3P29320 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EPHA3P29320 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
EPHA3P29320 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EPHA3P29320 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.39■□□□□ 0.7
EPHA3P29320 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
EPHA3P29320 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EPHA3P29320 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
EPHA3P29320 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHA3P29320 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHA3P29320 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHA3P29320 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
EPHA3P29320 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.39■□□□□ 0.69
EPHA3P29320 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.39■□□□□ 0.69
EPHA3P29320 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.39■□□□□ 0.69
EPHA3P29320 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHA3P29320 Z82202.1-201ENST00000623446 1880 ntBASIC19.39■□□□□ 0.69
EPHA3P29320 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
EPHA3P29320 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA3P29320 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA3P29320 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA3P29320 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA3P29320 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA3P29320 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EPHA3P29320 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.38■□□□□ 0.69
EPHA3P29320 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
EPHA3P29320 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EPHA3P29320 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA3P29320 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA3P29320 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.38■□□□□ 0.69
EPHA3P29320 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EPHA3P29320 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EPHA3P29320 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.38■□□□□ 0.69
EPHA3P29320 SLC7A5P1-201ENST00000568957 537 ntBASIC19.38■□□□□ 0.69
EPHA3P29320 AC019069.1-201ENST00000610008 1333 ntBASIC19.38■□□□□ 0.69
EPHA3P29320 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHA3P29320 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EPHA3P29320 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EPHA3P29320 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms