Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RXRBP28702 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RXRBP28702 AC117500.6-201ENST00000624871 588 ntBASIC26.47■■□□□ 1.83
RXRBP28702 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC26.46■■□□□ 1.83
RXRBP28702 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
RXRBP28702 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.46■■□□□ 1.83
RXRBP28702 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RXRBP28702 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC26.46■■□□□ 1.83
RXRBP28702 GXYLT1P6-201ENST00000456472 1187 ntBASIC26.46■■□□□ 1.83
RXRBP28702 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RXRBP28702 LY6E-213ENST00000522528 606 ntTSL 3 BASIC26.46■■□□□ 1.83
RXRBP28702 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC26.46■■□□□ 1.83
RXRBP28702 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC26.46■■□□□ 1.83
RXRBP28702 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RXRBP28702 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RXRBP28702 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC26.46■■□□□ 1.83
RXRBP28702 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RXRBP28702 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
RXRBP28702 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC26.45■■□□□ 1.83
RXRBP28702 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RXRBP28702 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RXRBP28702 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RXRBP28702 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC26.45■■□□□ 1.82
RXRBP28702 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC26.45■■□□□ 1.82
RXRBP28702 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC26.45■■□□□ 1.82
RXRBP28702 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC26.45■■□□□ 1.82
RXRBP28702 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.45■■□□□ 1.82
RXRBP28702 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.45■■□□□ 1.82
RXRBP28702 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RXRBP28702 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RXRBP28702 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RXRBP28702 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
RXRBP28702 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RXRBP28702 KRT18P13-201ENST00000400056 1290 ntBASIC26.44■■□□□ 1.82
RXRBP28702 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RXRBP28702 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC26.44■■□□□ 1.82
RXRBP28702 AC104692.2-201ENST00000603054 253 ntBASIC26.44■■□□□ 1.82
RXRBP28702 AL031008.1-201ENST00000619963 541 ntBASIC26.44■■□□□ 1.82
RXRBP28702 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RXRBP28702 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RXRBP28702 AC096733.2-201ENST00000609937 1394 ntBASIC26.44■■□□□ 1.82
RXRBP28702 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RXRBP28702 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
RXRBP28702 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC26.43■■□□□ 1.82
RXRBP28702 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
RXRBP28702 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
RXRBP28702 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
RXRBP28702 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RXRBP28702 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC26.42■■□□□ 1.82
RXRBP28702 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RXRBP28702 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RXRBP28702 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC26.42■■□□□ 1.82
RXRBP28702 AC092183.1-201ENST00000469884 875 ntBASIC26.42■■□□□ 1.82
RXRBP28702 CNP-204ENST00000472031 1019 ntTSL 2 BASIC26.42■■□□□ 1.82
RXRBP28702 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC26.42■■□□□ 1.82
RXRBP28702 AL160237.2-201ENST00000556165 472 ntBASIC26.42■■□□□ 1.82
RXRBP28702 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC26.42■■□□□ 1.82
RXRBP28702 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC26.42■■□□□ 1.82
RXRBP28702 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RXRBP28702 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RXRBP28702 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RXRBP28702 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC26.41■■□□□ 1.82
RXRBP28702 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
RXRBP28702 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.41■■□□□ 1.82
RXRBP28702 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RXRBP28702 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RXRBP28702 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RXRBP28702 RPP21-221ENST00000428040 594 ntTSL 2 BASIC26.41■■□□□ 1.82
RXRBP28702 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RXRBP28702 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC26.41■■□□□ 1.82
RXRBP28702 TSPY17P-201ENST00000450329 467 ntBASIC26.41■■□□□ 1.82
RXRBP28702 EMBP1-201ENST00000458200 901 ntBASIC26.41■■□□□ 1.82
RXRBP28702 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RXRBP28702 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
RXRBP28702 TBCB-205ENST00000585746 875 ntTSL 3 BASIC26.41■■□□□ 1.82
RXRBP28702 AL671883.3-201ENST00000603274 991 ntBASIC26.41■■□□□ 1.82
RXRBP28702 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC26.41■■□□□ 1.82
RXRBP28702 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RXRBP28702 AL023803.3-201ENST00000615559 522 ntBASIC26.41■■□□□ 1.82
RXRBP28702 AC011298.2-201ENST00000617989 482 ntBASIC26.41■■□□□ 1.82
RXRBP28702 HYMAI.1-201ENST00000620949 238 ntBASIC26.41■■□□□ 1.82
RXRBP28702 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RXRBP28702 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RXRBP28702 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RXRBP28702 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
RXRBP28702 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC26.41■■□□□ 1.82
RXRBP28702 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
RXRBP28702 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.41■■□□□ 1.82
RXRBP28702 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RXRBP28702 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms