Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PTPN3P26045 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN3P26045 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN3P26045 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN3P26045 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN3P26045 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PTPN3P26045 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPN3P26045 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN3P26045 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN3P26045 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 SLC29A4P1-201ENST00000398760 971 ntBASIC20.38■□□□□ 0.85
PTPN3P26045 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.38■□□□□ 0.85
PTPN3P26045 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.38■□□□□ 0.85
PTPN3P26045 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.38■□□□□ 0.85
PTPN3P26045 AC092118.2-201ENST00000613495 667 ntBASIC20.38■□□□□ 0.85
PTPN3P26045 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PTPN3P26045 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN3P26045 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPN3P26045 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN3P26045 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.37■□□□□ 0.85
PTPN3P26045 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 HLA-G-202ENST00000376815 851 ntBASIC20.37■□□□□ 0.85
PTPN3P26045 HLA-G-203ENST00000376818 1127 ntBASIC20.37■□□□□ 0.85
PTPN3P26045 DUSP5P2-201ENST00000426873 1033 ntBASIC20.37■□□□□ 0.85
PTPN3P26045 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPN3P26045 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPN3P26045 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN3P26045 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPN3P26045 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
PTPN3P26045 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPN3P26045 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN3P26045 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN3P26045 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN3P26045 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PTPN3P26045 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN3P26045 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN3P26045 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN3P26045 AC090192.1-201ENST00000517740 490 ntBASIC20.36■□□□□ 0.85
PTPN3P26045 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN3P26045 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN3P26045 KRT16P6-202ENST00000425692 1426 ntBASIC20.36■□□□□ 0.85
PTPN3P26045 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTPN3P26045 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.35■□□□□ 0.85
PTPN3P26045 AC125437.2-201ENST00000625180 2167 ntBASIC20.35■□□□□ 0.85
PTPN3P26045 TMEM179-206ENST00000616017 1645 ntBASIC20.35■□□□□ 0.85
PTPN3P26045 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN3P26045 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTPN3P26045 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN3P26045 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN3P26045 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN3P26045 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.35■□□□□ 0.85
PTPN3P26045 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PTPN3P26045 AC091874.3-201ENST00000512672 1195 ntBASIC20.35■□□□□ 0.85
PTPN3P26045 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTPN3P26045 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.35■□□□□ 0.85
PTPN3P26045 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.35■□□□□ 0.85
PTPN3P26045 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN3P26045 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN3P26045 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN3P26045 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTPN3P26045 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN3P26045 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN3P26045 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN3P26045 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PTPN3P26045 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN3P26045 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms