Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.79■□□□□ 0.28
LMO1P25800 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.78■□□□□ 0.28
LMO1P25800 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.78■□□□□ 0.28
LMO1P25800 AC098818.2-201ENST00000564925 2320 ntBASIC16.78■□□□□ 0.28
LMO1P25800 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 AC026185.1-201ENST00000445748 174 ntBASIC16.78■□□□□ 0.28
LMO1P25800 AC090192.1-201ENST00000517740 490 ntBASIC16.78■□□□□ 0.28
LMO1P25800 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 RAP2CP1-201ENST00000605103 478 ntBASIC16.78■□□□□ 0.28
LMO1P25800 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.78■□□□□ 0.28
LMO1P25800 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 AL691432.2-201ENST00000607222 2038 ntBASIC16.78■□□□□ 0.28
LMO1P25800 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LMO1P25800 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.78■□□□□ 0.28
LMO1P25800 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LMO1P25800 PCDHAC2-203ENST00000615316 3011 ntBASIC16.78■□□□□ 0.28
LMO1P25800 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO1P25800 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO1P25800 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.77■□□□□ 0.28
LMO1P25800 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LMO1P25800 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.77■□□□□ 0.28
LMO1P25800 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO1P25800 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO1P25800 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO1P25800 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LMO1P25800 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.77■□□□□ 0.28
LMO1P25800 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LMO1P25800 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.77■□□□□ 0.28
LMO1P25800 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LMO1P25800 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.77■□□□□ 0.28
LMO1P25800 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LMO1P25800 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LMO1P25800 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LMO1P25800 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LMO1P25800 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LMO1P25800 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LMO1P25800 TMEM179-206ENST00000616017 1645 ntBASIC16.77■□□□□ 0.27
LMO1P25800 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
LMO1P25800 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
LMO1P25800 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LMO1P25800 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LMO1P25800 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.76■□□□□ 0.27
LMO1P25800 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LMO1P25800 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.76■□□□□ 0.27
LMO1P25800 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.76■□□□□ 0.27
LMO1P25800 C2orf69P4-201ENST00000565394 541 ntBASIC16.76■□□□□ 0.27
LMO1P25800 AL031963.3-201ENST00000606441 850 ntBASIC16.76■□□□□ 0.27
LMO1P25800 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 KRT8P20-201ENST00000423953 1409 ntBASIC16.76■□□□□ 0.27
LMO1P25800 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LMO1P25800 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.76■□□□□ 0.27
LMO1P25800 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO1P25800 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 KRT17P1-201ENST00000399211 1546 ntBASIC16.75■□□□□ 0.27
LMO1P25800 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LMO1P25800 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO1P25800 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO1P25800 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO1P25800 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LMO1P25800 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO1P25800 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.75■□□□□ 0.27
LMO1P25800 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO1P25800 AF201337.1-201ENST00000520239 748 ntBASIC16.75■□□□□ 0.27
LMO1P25800 AC023632.3-201ENST00000521633 145 ntBASIC16.75■□□□□ 0.27
LMO1P25800 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO1P25800 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO1P25800 AL050303.2-201ENST00000619798 666 ntBASIC16.75■□□□□ 0.27
LMO1P25800 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO1P25800 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO1P25800 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms