Protein–RNA interactions for Protein: P25359

RRP43, Exosome complex component RRP43, yeastyeast

Predicted RBP Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP43P25359 YOR102WYOR102W 351 nt1.24□□□□□ -2.21
RRP43P25359 BEM2YER155C 6504 nt1.23□□□□□ -2.21
RRP43P25359 NST1YNL091W 3723 nt1.22□□□□□ -2.21
RRP43P25359 SDH6YDR379C-A 240 nt1.22□□□□□ -2.21
RRP43P25359 snR190snR190 190 nt1.22□□□□□ -2.21
RRP43P25359 NUP157YER105C 4176 nt1.22□□□□□ -2.21
RRP43P25359 YFR012W-AYFR012W-A 87 nt1.21□□□□□ -2.22
RRP43P25359 YBL053WYBL053W 375 nt1.21□□□□□ -2.22
RRP43P25359 YGL182CYGL182C 324 nt1.19□□□□□ -2.22
RRP43P25359 YOR314W-AYOR314W-A 111 nt1.19□□□□□ -2.22
RRP43P25359 ASE1YOR058C 2658 nt1.18□□□□□ -2.22
RRP43P25359 snR48snR48 113 nt1.18□□□□□ -2.22
RRP43P25359 FYV10YIL097W 1551 nt1.17□□□□□ -2.22
RRP43P25359 YNL284C-BYNL284C-B 5268 nt1.17□□□□□ -2.22
RRP43P25359 TAH1YCR060W 336 nt1.15□□□□□ -2.23
RRP43P25359 YLR041WYLR041W 321 nt1.15□□□□□ -2.23
RRP43P25359 YBL039C-AYBL039C-A 84 nt1.15□□□□□ -2.23
RRP43P25359 SEC8YPR055W 3198 nt1.15□□□□□ -2.23
RRP43P25359 PRP16YKR086W 3216 nt1.15□□□□□ -2.23
RRP43P25359 LAA1YJL207C 6045 nt1.14□□□□□ -2.23
RRP43P25359 KAP120YPL125W 3099 nt1.13□□□□□ -2.23
RRP43P25359 CHS6YJL099W 2241 nt1.13□□□□□ -2.23
RRP43P25359 YDL073WYDL073W 2955 nt1.13□□□□□ -2.23
RRP43P25359 SIP4YJL089W 2490 nt1.12□□□□□ -2.23
RRP43P25359 YLR232WYLR232W 348 nt1.11□□□□□ -2.23
RRP43P25359 VAM6YDL077C 3150 nt1.11□□□□□ -2.23
RRP43P25359 EMT1tM(CAU)D 73 nt1.1□□□□□ -2.23
RRP43P25359 EMT5tM(CAU)J1 73 nt1.1□□□□□ -2.23
RRP43P25359 EMT3tM(CAU)J2 73 nt1.1□□□□□ -2.23
RRP43P25359 EMT4tM(CAU)M 73 nt1.1□□□□□ -2.23
RRP43P25359 EMT2tM(CAU)O2 73 nt1.1□□□□□ -2.23
RRP43P25359 YLR399W-AYLR399W-A 105 nt1.1□□□□□ -2.23
RRP43P25359 MSH3YCR092C 3057 nt1.1□□□□□ -2.23
RRP43P25359 tL(UAA)QtL(UAA)Q 85 nt1.09□□□□□ -2.23
RRP43P25359 YHR131W-AYHR131W-A 246 nt1.07□□□□□ -2.24
RRP43P25359 YPR160W-AYPR160W-A 81 nt1.07□□□□□ -2.24
RRP43P25359 YGR130CYGR130C 2451 nt1.06□□□□□ -2.24
RRP43P25359 YOR329W-AYOR329W-A 210 nt1.06□□□□□ -2.24
RRP43P25359 tV(UAC)BtV(UAC)B 74 nt1.05□□□□□ -2.24
RRP43P25359 tV(UAC)DtV(UAC)D 74 nt1.05□□□□□ -2.24
RRP43P25359 BEM3YPL115C 3387 nt1.04□□□□□ -2.24
RRP43P25359 SPT7YBR081C 3999 nt1.03□□□□□ -2.24
RRP43P25359 YJR029WYJR029W 5268 nt1.03□□□□□ -2.24
RRP43P25359 YPR137C-BYPR137C-B 5268 nt1.03□□□□□ -2.24
RRP43P25359 YDR544CYDR544C 429 nt1.03□□□□□ -2.24
RRP43P25359 tM(CAU)Q2tM(CAU)Q2 78 nt1.03□□□□□ -2.24
RRP43P25359 QCR9YGR183C 201 nt1.03□□□□□ -2.24
RRP43P25359 YNL067W-BYNL067W-B 141 nt1.02□□□□□ -2.25
RRP43P25359 SCC2YDR180W 4482 nt1.02□□□□□ -2.25
RRP43P25359 tN(GUU)QtN(GUU)Q 71 nt1.01□□□□□ -2.25
RRP43P25359 BUD3YCL014W 4911 nt1.01□□□□□ -2.25
RRP43P25359 UBP3YER151C 2739 nt1□□□□□ -2.25
RRP43P25359 YCL001W-BYCL001W-B 255 nt1□□□□□ -2.25
RRP43P25359 YSP1YHR155W 3687 nt0.99□□□□□ -2.25
RRP43P25359 PAU24YBR301W 363 nt0.99□□□□□ -2.25
RRP43P25359 snR39BsnR39B 96 nt0.96□□□□□ -2.26
RRP43P25359 COG6YNL041C 2520 nt0.96□□□□□ -2.26
RRP43P25359 IML1YJR138W 4755 nt0.96□□□□□ -2.26
RRP43P25359 RPM2YML091C 3609 nt0.95□□□□□ -2.26
RRP43P25359 DOP1YDR141C 5097 nt0.95□□□□□ -2.26
RRP43P25359 YCR095W-AYCR095W-A 159 nt0.95□□□□□ -2.26
RRP43P25359 OST4YDL232W 111 nt0.94□□□□□ -2.26
RRP43P25359 RKR1YMR247C 4689 nt0.93□□□□□ -2.26
RRP43P25359 YDR210WYDR210W 228 nt0.93□□□□□ -2.26
RRP43P25359 SOM1YEL059C-A 225 nt0.93□□□□□ -2.26
RRP43P25359 YJL127W-AYJL127W-A 117 nt0.92□□□□□ -2.26
RRP43P25359 Q0143Q0143 153 nt0.91□□□□□ -2.26
RRP43P25359 YPR117WYPR117W 7470 nt0.91□□□□□ -2.26
RRP43P25359 YBR072C-AYBR072C-A 162 nt0.9□□□□□ -2.27
RRP43P25359 SEC1YDR164C 2175 nt0.89□□□□□ -2.27
RRP43P25359 YBR099CYBR099C 384 nt0.89□□□□□ -2.27
RRP43P25359 ULP2YIL031W 3105 nt0.88□□□□□ -2.27
RRP43P25359 YGR146C-AYGR146C-A 162 nt0.88□□□□□ -2.27
RRP43P25359 GLG1YKR058W 1851 nt0.88□□□□□ -2.27
RRP43P25359 YLL006W-AYLL006W-A 177 nt0.85□□□□□ -2.27
RRP43P25359 YIL071W-AYIL071W-A 477 nt0.84□□□□□ -2.27
RRP43P25359 NNF2YGR089W 2811 nt0.83□□□□□ -2.28
RRP43P25359 snR85snR85 171 nt0.82□□□□□ -2.28
RRP43P25359 YNL205CYNL205C 423 nt0.82□□□□□ -2.28
RRP43P25359 STF2YGR008C 255 nt0.8□□□□□ -2.28
RRP43P25359 YPR159C-AYPR159C-A 102 nt0.8□□□□□ -2.28
RRP43P25359 LTE1YAL024C 4308 nt0.78□□□□□ -2.28
RRP43P25359 CSE1YGL238W 2883 nt0.76□□□□□ -2.29
RRP43P25359 BIR1YJR089W 2865 nt0.76□□□□□ -2.29
RRP43P25359 YOR192C-BYOR192C-B 5313 nt0.75□□□□□ -2.29
RRP43P25359 PMP2YEL017C-A 132 nt0.75□□□□□ -2.29
RRP43P25359 HUG1YML058W-A 207 nt0.74□□□□□ -2.29
RRP43P25359 PET111YMR257C 2403 nt0.74□□□□□ -2.29
RRP43P25359 NIP1YMR309C 2439 nt0.73□□□□□ -2.29
RRP43P25359 YNL266WYNL266W 420 nt0.71□□□□□ -2.3
RRP43P25359 BUL2YML111W 2763 nt0.7□□□□□ -2.3
RRP43P25359 tT(AGU)BtT(AGU)B 73 nt0.69□□□□□ -2.3
RRP43P25359 tT(AGU)CtT(AGU)C 73 nt0.69□□□□□ -2.3
RRP43P25359 tT(AGU)DtT(AGU)D 73 nt0.69□□□□□ -2.3
RRP43P25359 tT(AGU)HtT(AGU)H 73 nt0.69□□□□□ -2.3
RRP43P25359 tT(AGU)I1tT(AGU)I1 73 nt0.69□□□□□ -2.3
RRP43P25359 tT(AGU)I2tT(AGU)I2 73 nt0.69□□□□□ -2.3
RRP43P25359 tT(AGU)JtT(AGU)J 73 nt0.69□□□□□ -2.3
RRP43P25359 tT(AGU)N1tT(AGU)N1 73 nt0.69□□□□□ -2.3
RRP43P25359 tT(AGU)N2tT(AGU)N2 73 nt0.69□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms