Protein–RNA interactions for Protein: P25037

UBP1, Ubiquitin carboxyl-terminal hydrolase 1, yeastyeast

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP1P25037 RTP1YMR185W 2946 nt2.15□□□□□ -2.06
UBP1P25037 YNL284C-BYNL284C-B 5268 nt2.15□□□□□ -2.07
UBP1P25037 TMA7YLR262C-A 195 nt2.15□□□□□ -2.07
UBP1P25037 FYV10YIL097W 1551 nt2.15□□□□□ -2.07
UBP1P25037 YLR232WYLR232W 348 nt2.14□□□□□ -2.07
UBP1P25037 snR45snR45 172 nt2.14□□□□□ -2.07
UBP1P25037 PKH3YDR466W 2697 nt2.14□□□□□ -2.07
UBP1P25037 YJL127W-AYJL127W-A 117 nt2.13□□□□□ -2.07
UBP1P25037 SKI3YPR189W 4299 nt2.13□□□□□ -2.07
UBP1P25037 CAT8YMR280C 4302 nt2.12□□□□□ -2.07
UBP1P25037 MGA2YIR033W 3342 nt2.12□□□□□ -2.07
UBP1P25037 NUP145YGL092W 3954 nt2.12□□□□□ -2.07
UBP1P25037 snR81snR81 201 nt2.12□□□□□ -2.07
UBP1P25037 YMR247W-AYMR247W-A 144 nt2.12□□□□□ -2.07
UBP1P25037 NOP9YJL010C 2001 nt2.1□□□□□ -2.07
UBP1P25037 YLR041WYLR041W 321 nt2.1□□□□□ -2.07
UBP1P25037 YDR210WYDR210W 228 nt2.09□□□□□ -2.07
UBP1P25037 KAP120YPL125W 3099 nt2.09□□□□□ -2.07
UBP1P25037 STO1YMR125W 2586 nt2.09□□□□□ -2.07
UBP1P25037 snR190snR190 190 nt2.08□□□□□ -2.08
UBP1P25037 COG6YNL041C 2520 nt2.08□□□□□ -2.08
UBP1P25037 BRR2YER172C 6492 nt2.07□□□□□ -2.08
UBP1P25037 BIR1YJR089W 2865 nt2.07□□□□□ -2.08
UBP1P25037 GEA2YEL022W 4380 nt2.06□□□□□ -2.08
UBP1P25037 KAP122YGL016W 3246 nt2.05□□□□□ -2.08
UBP1P25037 SET3YKR029C 2256 nt2.05□□□□□ -2.08
UBP1P25037 MON2YNL297C 4911 nt2.05□□□□□ -2.08
UBP1P25037 WAR1YML076C 2835 nt2.04□□□□□ -2.08
UBP1P25037 RPL26BYGR034W 384 nt2.04□□□□□ -2.08
UBP1P25037 YAL037C-AYAL037C-A 93 nt2.04□□□□□ -2.08
UBP1P25037 YNL266WYNL266W 420 nt2.04□□□□□ -2.08
UBP1P25037 FYV8YGR196C 2454 nt2.03□□□□□ -2.08
UBP1P25037 YBR072C-AYBR072C-A 162 nt2.03□□□□□ -2.08
UBP1P25037 YGR146C-AYGR146C-A 162 nt2.02□□□□□ -2.09
UBP1P25037 LAA1YJL207C 6045 nt2.02□□□□□ -2.09
UBP1P25037 SEC1YDR164C 2175 nt2.02□□□□□ -2.09
UBP1P25037 MEC1YBR136W 7107 nt2□□□□□ -2.09
UBP1P25037 IML1YJR138W 4755 nt1.99□□□□□ -2.09
UBP1P25037 tT(UGU)HtT(UGU)H 72 nt1.99□□□□□ -2.09
UBP1P25037 PIK1YNL267W 3201 nt1.98□□□□□ -2.09
UBP1P25037 APL3YBL037W 3078 nt1.98□□□□□ -2.09
UBP1P25037 KCS1YDR017C 3153 nt1.98□□□□□ -2.09
UBP1P25037 RAD9YDR217C 3930 nt1.95□□□□□ -2.1
UBP1P25037 snR62snR62 100 nt1.95□□□□□ -2.1
UBP1P25037 YOL083C-AYOL083C-A 141 nt1.95□□□□□ -2.1
UBP1P25037 ASE1YOR058C 2658 nt1.93□□□□□ -2.1
UBP1P25037 YBR200W-AYBR200W-A 165 nt1.92□□□□□ -2.1
UBP1P25037 PRP16YKR086W 3216 nt1.89□□□□□ -2.11
UBP1P25037 BEM3YPL115C 3387 nt1.89□□□□□ -2.11
UBP1P25037 YCS4YLR272C 3531 nt1.89□□□□□ -2.11
UBP1P25037 SWI4YER111C 3282 nt1.88□□□□□ -2.11
UBP1P25037 VPS15YBR097W 4365 nt1.88□□□□□ -2.11
UBP1P25037 IRA1YBR140C 9279 nt1.88□□□□□ -2.11
UBP1P25037 YDL073WYDL073W 2955 nt1.86□□□□□ -2.11
UBP1P25037 YBL071C-BYBL071C-B 99 nt1.85□□□□□ -2.11
UBP1P25037 DOP1YDR141C 5097 nt1.85□□□□□ -2.11
UBP1P25037 SEC8YPR055W 3198 nt1.84□□□□□ -2.11
UBP1P25037 NUP188YML103C 4968 nt1.84□□□□□ -2.11
UBP1P25037 tF(GAA)BtF(GAA)B 73 nt1.84□□□□□ -2.11
UBP1P25037 tF(GAA)FtF(GAA)F 73 nt1.84□□□□□ -2.11
UBP1P25037 tF(GAA)GtF(GAA)G 73 nt1.84□□□□□ -2.11
UBP1P25037 tF(GAA)H1tF(GAA)H1 73 nt1.84□□□□□ -2.11
UBP1P25037 tF(GAA)H2tF(GAA)H2 73 nt1.84□□□□□ -2.11
UBP1P25037 tF(GAA)MtF(GAA)M 73 nt1.84□□□□□ -2.11
UBP1P25037 tF(GAA)P1tF(GAA)P1 73 nt1.84□□□□□ -2.11
UBP1P25037 tF(GAA)P2tF(GAA)P2 73 nt1.84□□□□□ -2.11
UBP1P25037 YBR196C-AYBR196C-A 150 nt1.84□□□□□ -2.11
UBP1P25037 BST1YFL025C 3090 nt1.83□□□□□ -2.12
UBP1P25037 tH(GUG)E1tH(GUG)E1 72 nt1.83□□□□□ -2.12
UBP1P25037 tH(GUG)E2tH(GUG)E2 72 nt1.83□□□□□ -2.12
UBP1P25037 tH(GUG)G1tH(GUG)G1 72 nt1.83□□□□□ -2.12
UBP1P25037 tH(GUG)G2tH(GUG)G2 72 nt1.83□□□□□ -2.12
UBP1P25037 tH(GUG)HtH(GUG)H 72 nt1.83□□□□□ -2.12
UBP1P25037 tH(GUG)KtH(GUG)K 72 nt1.83□□□□□ -2.12
UBP1P25037 tH(GUG)MtH(GUG)M 72 nt1.83□□□□□ -2.12
UBP1P25037 ROM2YLR371W 4071 nt1.82□□□□□ -2.12
UBP1P25037 SEC3YER008C 4011 nt1.82□□□□□ -2.12
UBP1P25037 TRM732YMR259C 4263 nt1.81□□□□□ -2.12
UBP1P25037 AZF1YOR113W 2745 nt1.81□□□□□ -2.12
UBP1P25037 UBP3YER151C 2739 nt1.8□□□□□ -2.12
UBP1P25037 tN(GUU)QtN(GUU)Q 71 nt1.8□□□□□ -2.12
UBP1P25037 tV(UAC)BtV(UAC)B 74 nt1.79□□□□□ -2.12
UBP1P25037 tV(UAC)DtV(UAC)D 74 nt1.79□□□□□ -2.12
UBP1P25037 YDR034C-AYDR034C-A 177 nt1.78□□□□□ -2.12
UBP1P25037 YBL100W-CYBL100W-C 120 nt1.77□□□□□ -2.13
UBP1P25037 SEC10YLR166C 2616 nt1.77□□□□□ -2.13
UBP1P25037 UTP20YBL004W 7482 nt1.76□□□□□ -2.13
UBP1P25037 RPS26AYGL189C 360 nt1.76□□□□□ -2.13
UBP1P25037 YLR399W-AYLR399W-A 105 nt1.76□□□□□ -2.13
UBP1P25037 YOL164W-AYOL164W-A 183 nt1.76□□□□□ -2.13
UBP1P25037 RPM2YML091C 3609 nt1.76□□□□□ -2.13
UBP1P25037 CDC25YLR310C 4770 nt1.75□□□□□ -2.13
UBP1P25037 YPR160W-AYPR160W-A 81 nt1.73□□□□□ -2.13
UBP1P25037 NNF2YGR089W 2811 nt1.73□□□□□ -2.13
UBP1P25037 EST2YLR318W 2655 nt1.73□□□□□ -2.13
UBP1P25037 SPC110YDR356W 2835 nt1.72□□□□□ -2.13
UBP1P25037 CDC39YCR093W 6327 nt1.71□□□□□ -2.14
UBP1P25037 YSP1YHR155W 3687 nt1.7□□□□□ -2.14
UBP1P25037 YGR240C-AYGR240C-A 201 nt1.7□□□□□ -2.14
UBP1P25037 GLG1YKR058W 1851 nt1.69□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 41.2 ms