Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB1P19838 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB1P19838 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB1P19838 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB1P19838 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NFKB1P19838 DUSP5P2-201ENST00000426873 1033 ntBASIC20.33■□□□□ 0.85
NFKB1P19838 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.33■□□□□ 0.85
NFKB1P19838 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.33■□□□□ 0.85
NFKB1P19838 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.33■□□□□ 0.85
NFKB1P19838 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
NFKB1P19838 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NFKB1P19838 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NFKB1P19838 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NFKB1P19838 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
NFKB1P19838 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NFKB1P19838 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
NFKB1P19838 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NFKB1P19838 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.32■□□□□ 0.84
NFKB1P19838 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB1P19838 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB1P19838 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB1P19838 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB1P19838 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB1P19838 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.32■□□□□ 0.84
NFKB1P19838 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.32■□□□□ 0.84
NFKB1P19838 AC092118.2-201ENST00000613495 667 ntBASIC20.32■□□□□ 0.84
NFKB1P19838 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.32■□□□□ 0.84
NFKB1P19838 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB1P19838 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB1P19838 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NFKB1P19838 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB1P19838 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NFKB1P19838 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.31■□□□□ 0.84
NFKB1P19838 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.31■□□□□ 0.84
NFKB1P19838 AC023632.3-201ENST00000521633 145 ntBASIC20.31■□□□□ 0.84
NFKB1P19838 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.31■□□□□ 0.84
NFKB1P19838 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.31■□□□□ 0.84
NFKB1P19838 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.31■□□□□ 0.84
NFKB1P19838 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.31■□□□□ 0.84
NFKB1P19838 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NFKB1P19838 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB1P19838 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.3■□□□□ 0.84
NFKB1P19838 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NFKB1P19838 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.3■□□□□ 0.84
NFKB1P19838 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.3■□□□□ 0.84
NFKB1P19838 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.3■□□□□ 0.84
NFKB1P19838 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
NFKB1P19838 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 HLA-G-202ENST00000376815 851 ntBASIC20.3■□□□□ 0.84
NFKB1P19838 HLA-G-203ENST00000376818 1127 ntBASIC20.3■□□□□ 0.84
NFKB1P19838 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.3■□□□□ 0.84
NFKB1P19838 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NFKB1P19838 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NFKB1P19838 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.3■□□□□ 0.84
NFKB1P19838 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.3■□□□□ 0.84
NFKB1P19838 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.3■□□□□ 0.84
NFKB1P19838 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB1P19838 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 KRT16P6-202ENST00000425692 1426 ntBASIC20.29■□□□□ 0.84
NFKB1P19838 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NFKB1P19838 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.29■□□□□ 0.84
NFKB1P19838 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NFKB1P19838 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.29■□□□□ 0.84
NFKB1P19838 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.29■□□□□ 0.84
NFKB1P19838 AC091874.3-201ENST00000512672 1195 ntBASIC20.29■□□□□ 0.84
NFKB1P19838 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NFKB1P19838 AC098934.4-201ENST00000564127 592 ntBASIC20.29■□□□□ 0.84
NFKB1P19838 AL138781.1-201ENST00000566567 1274 ntBASIC20.29■□□□□ 0.84
NFKB1P19838 AL109923.1-201ENST00000618799 583 ntBASIC20.29■□□□□ 0.84
NFKB1P19838 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.29■□□□□ 0.84
NFKB1P19838 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.29■□□□□ 0.84
NFKB1P19838 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms