Protein–RNA interactions for Protein: P18899

DDR48, Stress protein DDR48, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDR48P18899 CBS1YDL069C 690 nt-0.63□□□□□ -2.51
DDR48P18899 YER053C-AYER053C-A 114 nt-0.63□□□□□ -2.51
DDR48P18899 snR49snR49 165 nt-0.63□□□□□ -2.51
DDR48P18899 COG6YNL041C 2520 nt-0.63□□□□□ -2.51
DDR48P18899 YDR544CYDR544C 429 nt-0.64□□□□□ -2.51
DDR48P18899 YFL063WYFL063W 456 nt-0.64□□□□□ -2.51
DDR48P18899 YLR154W-FYLR154W-F 141 nt-0.64□□□□□ -2.51
DDR48P18899 YCR038W-AYCR038W-A 126 nt-0.65□□□□□ -2.51
DDR48P18899 snR161snR161 161 nt-0.65□□□□□ -2.51
DDR48P18899 APQ12YIL040W 417 nt-0.66□□□□□ -2.52
DDR48P18899 YMR193C-AYMR193C-A 387 nt-0.66□□□□□ -2.52
DDR48P18899 YPR010C-AYPR010C-A 219 nt-0.66□□□□□ -2.52
DDR48P18899 YGL052WYGL052W 306 nt-0.67□□□□□ -2.52
DDR48P18899 YGL182CYGL182C 324 nt-0.67□□□□□ -2.52
DDR48P18899 RPS27BYHR021C 249 nt-0.67□□□□□ -2.52
DDR48P18899 VPS20YMR077C 666 nt-0.67□□□□□ -2.52
DDR48P18899 tP(UGG)QtP(UGG)Q 72 nt-0.68□□□□□ -2.52
DDR48P18899 YKL123WYKL123W 381 nt-0.68□□□□□ -2.52
DDR48P18899 YLL019W-AYLL019W-A 93 nt-0.68□□□□□ -2.52
DDR48P18899 CSE2YNR010W 450 nt-0.68□□□□□ -2.52
DDR48P18899 snR54snR54 86 nt-0.68□□□□□ -2.52
DDR48P18899 CSN9YDR179C 489 nt-0.69□□□□□ -2.52
DDR48P18899 tQ(UUG)QtQ(UUG)Q 76 nt-0.7□□□□□ -2.52
DDR48P18899 TOM22YNL131W 459 nt-0.7□□□□□ -2.52
DDR48P18899 BI2Q0110 1272 nt-0.71□□□□□ -2.52
DDR48P18899 YGR069WYGR069W 336 nt-0.71□□□□□ -2.52
DDR48P18899 YBR223W-AYBR223W-A 120 nt-0.71□□□□□ -2.52
DDR48P18899 YIL115W-AYIL115W-A 372 nt-0.72□□□□□ -2.52
DDR48P18899 YJL197C-AYJL197C-A 282 nt-0.72□□□□□ -2.52
DDR48P18899 YOR170WYOR170W 306 nt-0.72□□□□□ -2.52
DDR48P18899 YHL009W-BYHL009W-B 5409 nt-0.72□□□□□ -2.52
DDR48P18899 YNR077CYNR077C 255 nt-0.75□□□□□ -2.53
DDR48P18899 YER006C-AYER006C-A 318 nt-0.76□□□□□ -2.53
DDR48P18899 YJL077W-AYJL077W-A 87 nt-0.76□□□□□ -2.53
DDR48P18899 YAF9YNL107W 681 nt-0.76□□□□□ -2.53
DDR48P18899 YOR015WYOR015W 360 nt-0.76□□□□□ -2.53
DDR48P18899 snR74snR74 88 nt-0.77□□□□□ -2.53
DDR48P18899 YIL032CYIL032C 357 nt-0.77□□□□□ -2.53
DDR48P18899 YML099W-AYML099W-A 330 nt-0.77□□□□□ -2.53
DDR48P18899 HMRA1YCR097W 381 nt-0.78□□□□□ -2.53
DDR48P18899 YOR072W-BYOR072W-B 162 nt-0.78□□□□□ -2.53
DDR48P18899 YDR048CYDR048C 315 nt-0.79□□□□□ -2.54
DDR48P18899 YPR016W-AYPR016W-A 261 nt-0.79□□□□□ -2.54
DDR48P18899 snR41snR41 95 nt-0.79□□□□□ -2.54
DDR48P18899 YER137W-AYER137W-A 306 nt-0.8□□□□□ -2.54
DDR48P18899 JLP2YMR132C 627 nt-0.8□□□□□ -2.54
DDR48P18899 snR50snR50 90 nt-0.8□□□□□ -2.54
DDR48P18899 YNL266WYNL266W 420 nt-0.81□□□□□ -2.54
DDR48P18899 YPL060C-AYPL060C-A 3315 nt-0.82□□□□□ -2.54
DDR48P18899 snR60snR60 104 nt-0.82□□□□□ -2.54
DDR48P18899 STE18YJR086W 333 nt-0.82□□□□□ -2.54
DDR48P18899 YOR314W-AYOR314W-A 111 nt-0.82□□□□□ -2.54
DDR48P18899 snR69snR69 101 nt-0.83□□□□□ -2.54
DDR48P18899 YDL158CYDL158C 309 nt-0.83□□□□□ -2.54
DDR48P18899 YER090C-AYER090C-A 90 nt-0.83□□□□□ -2.54
DDR48P18899 YGL149WYGL149W 306 nt-0.84□□□□□ -2.54
DDR48P18899 YLR434CYLR434C 384 nt-0.84□□□□□ -2.54
DDR48P18899 YBL039C-AYBL039C-A 84 nt-0.84□□□□□ -2.54
DDR48P18899 snR189snR189 189 nt-0.84□□□□□ -2.54
DDR48P18899 SKI7YOR076C 2244 nt-0.85□□□□□ -2.55
DDR48P18899 YDR102CYDR102C 333 nt-0.86□□□□□ -2.55
DDR48P18899 YNL122CYNL122C 348 nt-0.86□□□□□ -2.55
DDR48P18899 tW(UCA)QtW(UCA)Q 74 nt-0.87□□□□□ -2.55
DDR48P18899 tY(GUA)QtY(GUA)Q 84 nt-0.87□□□□□ -2.55
DDR48P18899 YOR121CYOR121C 306 nt-0.88□□□□□ -2.55
DDR48P18899 RDS3YPR094W 324 nt-0.88□□□□□ -2.55
DDR48P18899 YBR285WYBR285W 435 nt-0.89□□□□□ -2.55
DDR48P18899 YLR406C-AYLR406C-A 150 nt-0.9□□□□□ -2.55
DDR48P18899 snR67snR67 82 nt-0.91□□□□□ -2.56
DDR48P18899 YFL032WYFL032W 321 nt-0.92□□□□□ -2.56
DDR48P18899 YMR001C-AYMR001C-A 231 nt-0.92□□□□□ -2.56
DDR48P18899 YER097WYER097W 330 nt-0.93□□□□□ -2.56
DDR48P18899 YNL028WYNL028W 318 nt-0.93□□□□□ -2.56
DDR48P18899 YNL324WYNL324W 396 nt-0.93□□□□□ -2.56
DDR48P18899 PMP2YEL017C-A 132 nt-0.94□□□□□ -2.56
DDR48P18899 YOR008C-AYOR008C-A 225 nt-0.94□□□□□ -2.56
DDR48P18899 tM(CAU)Q2tM(CAU)Q2 78 nt-0.95□□□□□ -2.56
DDR48P18899 CDC65tQ(CUG)M 72 nt-0.95□□□□□ -2.56
DDR48P18899 ATP6Q0085 780 nt-0.96□□□□□ -2.56
DDR48P18899 YNL205CYNL205C 423 nt-0.96□□□□□ -2.56
DDR48P18899 YGR240C-AYGR240C-A 201 nt-0.97□□□□□ -2.56
DDR48P18899 YML054C-AYML054C-A 159 nt-0.97□□□□□ -2.56
DDR48P18899 BIL1YOR304C-A 231 nt-0.97□□□□□ -2.56
DDR48P18899 snR39BsnR39B 96 nt-0.97□□□□□ -2.56
DDR48P18899 snR81snR81 201 nt-0.99□□□□□ -2.57
DDR48P18899 YFL019CYFL019C 354 nt-0.99□□□□□ -2.57
DDR48P18899 YGL041CYGL041C 204 nt-0.99□□□□□ -2.57
DDR48P18899 YLR202CYLR202C 327 nt-0.99□□□□□ -2.57
DDR48P18899 snR77snR77 88 nt-1□□□□□ -2.57
DDR48P18899 YKL063CYKL063C 504 nt-1□□□□□ -2.57
DDR48P18899 YLR120W-AYLR120W-A 102 nt-1□□□□□ -2.57
DDR48P18899 YLR286W-AYLR286W-A 135 nt-1□□□□□ -2.57
DDR48P18899 YMR315W-AYMR315W-A 108 nt-1□□□□□ -2.57
DDR48P18899 tD(GUC)QtD(GUC)Q 75 nt-1.01□□□□□ -2.57
DDR48P18899 tR(UCU)Q1tR(UCU)Q1 73 nt-1.01□□□□□ -2.57
DDR48P18899 YNR025CYNR025C 360 nt-1.01□□□□□ -2.57
DDR48P18899 YGR146C-AYGR146C-A 162 nt-1.02□□□□□ -2.57
DDR48P18899 YOL013W-BYOL013W-B 291 nt-1.02□□□□□ -2.57
DDR48P18899 YOR381W-AYOR381W-A 168 nt-1.02□□□□□ -2.57
DDR48P18899 YBR178WYBR178W 375 nt-1.02□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms