Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN1P18031 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN1P18031 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN1P18031 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PTPN1P18031 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN1P18031 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPN1P18031 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN1P18031 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN1P18031 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN1P18031 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN1P18031 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN1P18031 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN1P18031 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN1P18031 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN1P18031 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN1P18031 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.17■□□□□ 0.98
PTPN1P18031 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN1P18031 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
PTPN1P18031 C1QBPP2-201ENST00000528754 825 ntBASIC21.17■□□□□ 0.98
PTPN1P18031 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN1P18031 KRT16P6-202ENST00000425692 1426 ntBASIC21.17■□□□□ 0.98
PTPN1P18031 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN1P18031 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN1P18031 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN1P18031 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN1P18031 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
PTPN1P18031 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN1P18031 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN1P18031 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN1P18031 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PTPN1P18031 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN1P18031 AL512408.1-201ENST00000569378 2000 ntBASIC21.16■□□□□ 0.98
PTPN1P18031 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN1P18031 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PTPN1P18031 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN1P18031 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.16■□□□□ 0.98
PTPN1P18031 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN1P18031 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN1P18031 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN1P18031 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN1P18031 AL158047.1-201ENST00000445918 881 ntBASIC21.16■□□□□ 0.98
PTPN1P18031 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN1P18031 RPPH1-201ENST00000516869 333 ntBASIC21.16■□□□□ 0.98
PTPN1P18031 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN1P18031 AL121829.2-201ENST00000620908 328 ntBASIC21.16■□□□□ 0.98
PTPN1P18031 AL359736.2-201ENST00000621992 437 ntBASIC21.16■□□□□ 0.98
PTPN1P18031 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN1P18031 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN1P18031 AC092667.1-201ENST00000434301 2586 ntBASIC21.16■□□□□ 0.98
PTPN1P18031 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PTPN1P18031 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
PTPN1P18031 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN1P18031 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN1P18031 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN1P18031 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN1P18031 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN1P18031 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN1P18031 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN1P18031 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN1P18031 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PTPN1P18031 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN1P18031 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN1P18031 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN1P18031 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN1P18031 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN1P18031 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PTPN1P18031 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN1P18031 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PTPN1P18031 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN1P18031 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
PTPN1P18031 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN1P18031 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.14■□□□□ 0.97
PTPN1P18031 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN1P18031 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.14■□□□□ 0.97
PTPN1P18031 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN1P18031 AL023875.1-201ENST00000640777 796 ntBASIC21.14■□□□□ 0.97
PTPN1P18031 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN1P18031 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN1P18031 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN1P18031 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN1P18031 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PTPN1P18031 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTPN1P18031 AL162377.1-201ENST00000618844 1793 ntBASIC21.13■□□□□ 0.97
PTPN1P18031 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN1P18031 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN1P18031 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN1P18031 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN1P18031 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN1P18031 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PTPN1P18031 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.13■□□□□ 0.97
PTPN1P18031 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.13■□□□□ 0.97
PTPN1P18031 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.13■□□□□ 0.97
PTPN1P18031 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN1P18031 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.13■□□□□ 0.97
PTPN1P18031 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN1P18031 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PTPN1P18031 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTPN1P18031 AL157384.1-201ENST00000445995 2473 ntBASIC21.13■□□□□ 0.97
PTPN1P18031 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTPN1P18031 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms