Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HMGA1P17096 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGA1P17096 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.83■□□□□ 0.93
HMGA1P17096 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGA1P17096 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.83■□□□□ 0.93
HMGA1P17096 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.83■□□□□ 0.92
HMGA1P17096 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGA1P17096 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
HMGA1P17096 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
HMGA1P17096 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGA1P17096 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA1P17096 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.82■□□□□ 0.92
HMGA1P17096 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA1P17096 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGA1P17096 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.82■□□□□ 0.92
HMGA1P17096 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.82■□□□□ 0.92
HMGA1P17096 MIR4785-201ENST00000585005 73 ntBASIC20.82■□□□□ 0.92
HMGA1P17096 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA1P17096 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA1P17096 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGA1P17096 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGA1P17096 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGA1P17096 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGA1P17096 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGA1P17096 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGA1P17096 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGA1P17096 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGA1P17096 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HMGA1P17096 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGA1P17096 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.81■□□□□ 0.92
HMGA1P17096 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGA1P17096 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.81■□□□□ 0.92
HMGA1P17096 BX088651.1-201ENST00000540551 451 ntBASIC20.81■□□□□ 0.92
HMGA1P17096 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGA1P17096 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGA1P17096 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HMGA1P17096 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGA1P17096 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
HMGA1P17096 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.8■□□□□ 0.92
HMGA1P17096 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.8■□□□□ 0.92
HMGA1P17096 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
HMGA1P17096 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
HMGA1P17096 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 AL353807.1-201ENST00000427475 662 ntBASIC20.8■□□□□ 0.92
HMGA1P17096 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
HMGA1P17096 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGA1P17096 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.8■□□□□ 0.92
HMGA1P17096 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGA1P17096 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 AC004264.1-201ENST00000608354 794 ntBASIC20.8■□□□□ 0.92
HMGA1P17096 REXO1L12P-201ENST00000622156 912 ntBASIC20.8■□□□□ 0.92
HMGA1P17096 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGA1P17096 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.79■□□□□ 0.92
HMGA1P17096 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.79■□□□□ 0.92
HMGA1P17096 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.79■□□□□ 0.92
HMGA1P17096 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.79■□□□□ 0.92
HMGA1P17096 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HMGA1P17096 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HMGA1P17096 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.79■□□□□ 0.92
HMGA1P17096 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGA1P17096 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGA1P17096 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGA1P17096 SMG8-203ENST00000578922 2178 ntBASIC20.78■□□□□ 0.92
HMGA1P17096 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGA1P17096 AC116351.2-201ENST00000606540 1585 ntBASIC20.78■□□□□ 0.92
HMGA1P17096 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HMGA1P17096 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGA1P17096 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.78■□□□□ 0.92
HMGA1P17096 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGA1P17096 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGA1P17096 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGA1P17096 AL355075.4-201ENST00000554988 638 ntBASIC20.78■□□□□ 0.92
HMGA1P17096 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms