Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.86■□□□□ 0.61
NCK1P16333 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCK1P16333 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCK1P16333 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.86■□□□□ 0.61
NCK1P16333 AC091799.1-201ENST00000422823 811 ntBASIC18.86■□□□□ 0.61
NCK1P16333 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCK1P16333 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.86■□□□□ 0.61
NCK1P16333 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.86■□□□□ 0.61
NCK1P16333 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.86■□□□□ 0.61
NCK1P16333 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCK1P16333 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
NCK1P16333 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
NCK1P16333 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCK1P16333 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.85■□□□□ 0.61
NCK1P16333 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.85■□□□□ 0.61
NCK1P16333 AC093503.3-201ENST00000624917 2352 ntBASIC18.85■□□□□ 0.61
NCK1P16333 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCK1P16333 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.85■□□□□ 0.61
NCK1P16333 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
NCK1P16333 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
NCK1P16333 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.85■□□□□ 0.61
NCK1P16333 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.85■□□□□ 0.61
NCK1P16333 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.85■□□□□ 0.61
NCK1P16333 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCK1P16333 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCK1P16333 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCK1P16333 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.85■□□□□ 0.61
NCK1P16333 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.85■□□□□ 0.61
NCK1P16333 AC104187.1-201ENST00000607510 612 ntBASIC18.85■□□□□ 0.61
NCK1P16333 AL031432.3-201ENST00000607698 485 ntBASIC18.85■□□□□ 0.61
NCK1P16333 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.85■□□□□ 0.61
NCK1P16333 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.85■□□□□ 0.61
NCK1P16333 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCK1P16333 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.85■□□□□ 0.61
NCK1P16333 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCK1P16333 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCK1P16333 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCK1P16333 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.85■□□□□ 0.61
NCK1P16333 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 Z82202.1-201ENST00000623446 1880 ntBASIC18.84■□□□□ 0.61
NCK1P16333 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NCK1P16333 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.84■□□□□ 0.61
NCK1P16333 IRS3P-201ENST00000223076 1006 ntBASIC18.84■□□□□ 0.61
NCK1P16333 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.84■□□□□ 0.61
NCK1P16333 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.84■□□□□ 0.61
NCK1P16333 AC007322.3-201ENST00000426526 701 ntBASIC18.84■□□□□ 0.61
NCK1P16333 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.84■□□□□ 0.61
NCK1P16333 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.84■□□□□ 0.61
NCK1P16333 DUX4L2-201ENST00000561772 1275 ntBASIC18.84■□□□□ 0.61
NCK1P16333 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
NCK1P16333 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.84■□□□□ 0.61
NCK1P16333 DUX4L6-201ENST00000626483 1275 ntBASIC18.84■□□□□ 0.61
NCK1P16333 DUX4L1-201ENST00000627662 1275 ntBASIC18.84■□□□□ 0.61
NCK1P16333 DUX4L8-201ENST00000629013 1275 ntBASIC18.84■□□□□ 0.61
NCK1P16333 DUX4L3-201ENST00000630187 1275 ntBASIC18.84■□□□□ 0.61
NCK1P16333 DUX4L7-201ENST00000630678 1275 ntBASIC18.84■□□□□ 0.61
NCK1P16333 DUX4L5-201ENST00000630834 1275 ntBASIC18.84■□□□□ 0.61
NCK1P16333 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NCK1P16333 AC138932.1-201ENST00000534164 6830 ntBASIC18.84■□□□□ 0.61
NCK1P16333 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.84■□□□□ 0.61
NCK1P16333 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.84■□□□□ 0.61
NCK1P16333 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCK1P16333 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NCK1P16333 AC008406.3-201ENST00000620001 1374 ntBASIC18.83■□□□□ 0.61
NCK1P16333 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
NCK1P16333 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NCK1P16333 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.83■□□□□ 0.61
NCK1P16333 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCK1P16333 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NCK1P16333 AP001160.3-201ENST00000601484 763 ntBASIC18.83■□□□□ 0.6
NCK1P16333 AC110285.6-201ENST00000617652 491 ntBASIC18.83■□□□□ 0.6
NCK1P16333 AL358852.1-201ENST00000623174 1268 ntBASIC18.83■□□□□ 0.6
NCK1P16333 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCK1P16333 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCK1P16333 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCK1P16333 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCK1P16333 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCK1P16333 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
NCK1P16333 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCK1P16333 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.83■□□□□ 0.6
NCK1P16333 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.83■□□□□ 0.6
NCK1P16333 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.83■□□□□ 0.6
NCK1P16333 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCK1P16333 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCK1P16333 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCK1P16333 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCK1P16333 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCK1P16333 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NCK1P16333 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCK1P16333 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.82■□□□□ 0.6
NCK1P16333 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms