Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.65■■□□□ 1.54
COL11A2P13942 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.65■■□□□ 1.54
COL11A2P13942 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.65■■□□□ 1.54
COL11A2P13942 AL121894.2-201ENST00000602977 491 ntBASIC24.65■■□□□ 1.54
COL11A2P13942 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.65■■□□□ 1.54
COL11A2P13942 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
COL11A2P13942 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL11A2P13942 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.65■■□□□ 1.54
COL11A2P13942 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
COL11A2P13942 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL11A2P13942 AC004980.1-204ENST00000429707 299 ntBASIC24.64■■□□□ 1.54
COL11A2P13942 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.64■■□□□ 1.54
COL11A2P13942 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.64■■□□□ 1.54
COL11A2P13942 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.64■■□□□ 1.54
COL11A2P13942 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.64■■□□□ 1.54
COL11A2P13942 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
COL11A2P13942 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL11A2P13942 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.64■■□□□ 1.53
COL11A2P13942 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL11A2P13942 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL11A2P13942 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
COL11A2P13942 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
COL11A2P13942 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.64■■□□□ 1.53
COL11A2P13942 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.64■■□□□ 1.53
COL11A2P13942 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL11A2P13942 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.64■■□□□ 1.53
COL11A2P13942 AC233723.2-201ENST00000623798 2106 ntBASIC24.64■■□□□ 1.53
COL11A2P13942 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.63■■□□□ 1.53
COL11A2P13942 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.63■■□□□ 1.53
COL11A2P13942 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.63■■□□□ 1.53
COL11A2P13942 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.63■■□□□ 1.53
COL11A2P13942 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A2P13942 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A2P13942 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A2P13942 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A2P13942 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A2P13942 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.63■■□□□ 1.53
COL11A2P13942 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A2P13942 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.63■■□□□ 1.53
COL11A2P13942 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
COL11A2P13942 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A2P13942 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL11A2P13942 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
COL11A2P13942 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.62■■□□□ 1.53
COL11A2P13942 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A2P13942 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A2P13942 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
COL11A2P13942 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A2P13942 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.62■■□□□ 1.53
COL11A2P13942 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.62■■□□□ 1.53
COL11A2P13942 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A2P13942 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL11A2P13942 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A2P13942 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.61■■□□□ 1.53
COL11A2P13942 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.61■■□□□ 1.53
COL11A2P13942 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A2P13942 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
COL11A2P13942 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A2P13942 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.61■■□□□ 1.53
COL11A2P13942 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A2P13942 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A2P13942 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A2P13942 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.61■■□□□ 1.53
COL11A2P13942 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A2P13942 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.61■■□□□ 1.53
COL11A2P13942 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.61■■□□□ 1.53
COL11A2P13942 ATP5G1P1-201ENST00000448724 379 ntBASIC24.61■■□□□ 1.53
COL11A2P13942 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC24.61■■□□□ 1.53
COL11A2P13942 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.61■■□□□ 1.53
COL11A2P13942 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL11A2P13942 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.61■■□□□ 1.53
COL11A2P13942 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A2P13942 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A2P13942 AC244015.2-201ENST00000616358 1861 ntBASIC24.6■■□□□ 1.53
COL11A2P13942 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A2P13942 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A2P13942 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC24.6■■□□□ 1.53
COL11A2P13942 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A2P13942 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A2P13942 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A2P13942 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A2P13942 Z98882.1-201ENST00000622160 2253 ntBASIC24.6■■□□□ 1.53
COL11A2P13942 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL11A2P13942 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
COL11A2P13942 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.6■■□□□ 1.53
COL11A2P13942 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.59■■□□□ 1.53
COL11A2P13942 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL11A2P13942 FAM8A6P-201ENST00000407496 1135 ntBASIC24.59■■□□□ 1.53
COL11A2P13942 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.59■■□□□ 1.53
COL11A2P13942 AC097488.1-201ENST00000507834 756 ntBASIC24.59■■□□□ 1.53
COL11A2P13942 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC24.59■■□□□ 1.53
COL11A2P13942 EGLN1P1-201ENST00000531623 762 ntBASIC24.59■■□□□ 1.53
COL11A2P13942 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.59■■□□□ 1.53
COL11A2P13942 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.59■■□□□ 1.53
COL11A2P13942 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.59■■□□□ 1.53
COL11A2P13942 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.59■■□□□ 1.53
COL11A2P13942 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.59■■□□□ 1.53
COL11A2P13942 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.59■■□□□ 1.53
COL11A2P13942 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.59■■□□□ 1.53
COL11A2P13942 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms