Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CDH1P12830 AC104771.1-201ENST00000603335 964 ntBASIC19.47■□□□□ 0.71
CDH1P12830 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.47■□□□□ 0.71
CDH1P12830 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH1P12830 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH1P12830 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH1P12830 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CDH1P12830 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH1P12830 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH1P12830 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH1P12830 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH1P12830 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH1P12830 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH1P12830 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH1P12830 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH1P12830 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH1P12830 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH1P12830 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH1P12830 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH1P12830 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH1P12830 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH1P12830 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH1P12830 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH1P12830 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH1P12830 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH1P12830 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH1P12830 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH1P12830 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.45■□□□□ 0.7
CDH1P12830 HLA-L-209ENST00000420110 1011 ntBASIC19.45■□□□□ 0.7
CDH1P12830 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.45■□□□□ 0.7
CDH1P12830 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.45■□□□□ 0.7
CDH1P12830 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.45■□□□□ 0.7
CDH1P12830 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 C2orf69P4-201ENST00000565394 541 ntBASIC19.45■□□□□ 0.7
CDH1P12830 AL138781.1-201ENST00000566567 1274 ntBASIC19.45■□□□□ 0.7
CDH1P12830 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH1P12830 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH1P12830 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH1P12830 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH1P12830 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDH1P12830 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH1P12830 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH1P12830 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 AC112907.3-201ENST00000577781 2400 ntBASIC19.44■□□□□ 0.7
CDH1P12830 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.44■□□□□ 0.7
CDH1P12830 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH1P12830 AC098934.4-201ENST00000564127 592 ntBASIC19.44■□□□□ 0.7
CDH1P12830 AC092118.2-201ENST00000613495 667 ntBASIC19.44■□□□□ 0.7
CDH1P12830 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH1P12830 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.44■□□□□ 0.7
CDH1P12830 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH1P12830 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH1P12830 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH1P12830 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH1P12830 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.43■□□□□ 0.7
CDH1P12830 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH1P12830 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH1P12830 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDH1P12830 DUSP5P2-201ENST00000426873 1033 ntBASIC19.43■□□□□ 0.7
CDH1P12830 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CDH1P12830 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.43■□□□□ 0.7
CDH1P12830 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH1P12830 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 AC099778.1-201ENST00000568593 1911 ntBASIC19.43■□□□□ 0.7
CDH1P12830 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDH1P12830 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH1P12830 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CDH1P12830 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH1P12830 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH1P12830 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH1P12830 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH1P12830 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CDH1P12830 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH1P12830 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDH1P12830 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms