Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB3P0DN86 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB3P0DN86 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB3P0DN86 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.43■□□□□ 0.22
CGB3P0DN86 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CGB3P0DN86 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.43■□□□□ 0.22
CGB3P0DN86 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CGB3P0DN86 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.42■□□□□ 0.22
CGB3P0DN86 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB3P0DN86 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CGB3P0DN86 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CGB3P0DN86 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.42■□□□□ 0.22
CGB3P0DN86 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.42■□□□□ 0.22
CGB3P0DN86 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB3P0DN86 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB3P0DN86 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.42■□□□□ 0.22
CGB3P0DN86 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB3P0DN86 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGB3P0DN86 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.42■□□□□ 0.22
CGB3P0DN86 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.41■□□□□ 0.22
CGB3P0DN86 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CGB3P0DN86 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.41■□□□□ 0.22
CGB3P0DN86 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.41■□□□□ 0.22
CGB3P0DN86 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.41■□□□□ 0.22
CGB3P0DN86 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.41■□□□□ 0.22
CGB3P0DN86 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.41■□□□□ 0.22
CGB3P0DN86 AC142086.2-201ENST00000569753 217 ntBASIC16.41■□□□□ 0.22
CGB3P0DN86 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.41■□□□□ 0.22
CGB3P0DN86 AL109923.1-201ENST00000618799 583 ntBASIC16.41■□□□□ 0.22
CGB3P0DN86 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.41■□□□□ 0.22
CGB3P0DN86 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGB3P0DN86 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB3P0DN86 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.4■□□□□ 0.22
CGB3P0DN86 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB3P0DN86 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGB3P0DN86 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB3P0DN86 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CGB3P0DN86 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.4■□□□□ 0.22
CGB3P0DN86 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.4■□□□□ 0.22
CGB3P0DN86 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGB3P0DN86 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.4■□□□□ 0.22
CGB3P0DN86 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.4■□□□□ 0.22
CGB3P0DN86 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.4■□□□□ 0.22
CGB3P0DN86 AL138781.1-201ENST00000566567 1274 ntBASIC16.4■□□□□ 0.22
CGB3P0DN86 AC005829.2-201ENST00000571422 1056 ntBASIC16.4■□□□□ 0.22
CGB3P0DN86 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.4■□□□□ 0.22
CGB3P0DN86 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB3P0DN86 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.4■□□□□ 0.22
CGB3P0DN86 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGB3P0DN86 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
CGB3P0DN86 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CGB3P0DN86 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.4■□□□□ 0.22
CGB3P0DN86 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB3P0DN86 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CGB3P0DN86 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CGB3P0DN86 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.39■□□□□ 0.21
CGB3P0DN86 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB3P0DN86 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CGB3P0DN86 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB3P0DN86 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.39■□□□□ 0.21
CGB3P0DN86 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CGB3P0DN86 AC097658.1-201ENST00000475555 843 ntBASIC16.39■□□□□ 0.21
CGB3P0DN86 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.39■□□□□ 0.21
CGB3P0DN86 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms