Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 YFR012W-AYFR012W-A 87 nt1.4□□□□□ -2.19
SRD1P09007 IML1YJR138W 4755 nt1.4□□□□□ -2.19
SRD1P09007 YGR164WYGR164W 336 nt1.37□□□□□ -2.19
SRD1P09007 ASE1YOR058C 2658 nt1.37□□□□□ -2.19
SRD1P09007 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
SRD1P09007 SEC8YPR055W 3198 nt1.36□□□□□ -2.19
SRD1P09007 YIL020C-AYIL020C-A 339 nt1.36□□□□□ -2.19
SRD1P09007 YNL205CYNL205C 423 nt1.36□□□□□ -2.19
SRD1P09007 KAP120YPL125W 3099 nt1.35□□□□□ -2.19
SRD1P09007 YLR041WYLR041W 321 nt1.35□□□□□ -2.19
SRD1P09007 snR48snR48 113 nt1.35□□□□□ -2.19
SRD1P09007 MYO1YHR023W 5787 nt1.35□□□□□ -2.19
SRD1P09007 FYV10YIL097W 1551 nt1.34□□□□□ -2.2
SRD1P09007 YHL015W-AYHL015W-A 84 nt1.33□□□□□ -2.2
SRD1P09007 PET127YOR017W 2403 nt1.32□□□□□ -2.2
SRD1P09007 FYV8YGR196C 2454 nt1.32□□□□□ -2.2
SRD1P09007 SNU13YEL026W 381 nt1.32□□□□□ -2.2
SRD1P09007 YOR102WYOR102W 351 nt1.32□□□□□ -2.2
SRD1P09007 YGL182CYGL182C 324 nt1.31□□□□□ -2.2
SRD1P09007 tV(UAC)BtV(UAC)B 74 nt1.3□□□□□ -2.2
SRD1P09007 tV(UAC)DtV(UAC)D 74 nt1.3□□□□□ -2.2
SRD1P09007 SIP4YJL089W 2490 nt1.29□□□□□ -2.2
SRD1P09007 snR85snR85 171 nt1.29□□□□□ -2.2
SRD1P09007 YLR399W-AYLR399W-A 105 nt1.29□□□□□ -2.2
SRD1P09007 YBL039C-AYBL039C-A 84 nt1.28□□□□□ -2.2
SRD1P09007 RAD9YDR217C 3930 nt1.28□□□□□ -2.2
SRD1P09007 PRP16YKR086W 3216 nt1.27□□□□□ -2.21
SRD1P09007 TAH1YCR060W 336 nt1.27□□□□□ -2.21
SRD1P09007 YPR160W-AYPR160W-A 81 nt1.27□□□□□ -2.21
SRD1P09007 NST1YNL091W 3723 nt1.26□□□□□ -2.21
SRD1P09007 YLR232WYLR232W 348 nt1.25□□□□□ -2.21
SRD1P09007 YOR314W-AYOR314W-A 111 nt1.24□□□□□ -2.21
SRD1P09007 CHS6YJL099W 2241 nt1.22□□□□□ -2.21
SRD1P09007 YHR131W-AYHR131W-A 246 nt1.22□□□□□ -2.21
SRD1P09007 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
SRD1P09007 tL(UAA)QtL(UAA)Q 85 nt1.2□□□□□ -2.22
SRD1P09007 STF2YGR008C 255 nt1.2□□□□□ -2.22
SRD1P09007 YOR329W-AYOR329W-A 210 nt1.2□□□□□ -2.22
SRD1P09007 HUG1YML058W-A 207 nt1.19□□□□□ -2.22
SRD1P09007 BEM3YPL115C 3387 nt1.18□□□□□ -2.22
SRD1P09007 YIL071W-AYIL071W-A 477 nt1.18□□□□□ -2.22
SRD1P09007 YCL001W-BYCL001W-B 255 nt1.18□□□□□ -2.22
SRD1P09007 tN(GUU)QtN(GUU)Q 71 nt1.17□□□□□ -2.22
SRD1P09007 UBP3YER151C 2739 nt1.17□□□□□ -2.22
SRD1P09007 YSP1YHR155W 3687 nt1.16□□□□□ -2.22
SRD1P09007 YBL109WYBL109W 336 nt1.15□□□□□ -2.23
SRD1P09007 RPM2YML091C 3609 nt1.15□□□□□ -2.23
SRD1P09007 SCC2YDR180W 4482 nt1.13□□□□□ -2.23
SRD1P09007 YDR544CYDR544C 429 nt1.12□□□□□ -2.23
SRD1P09007 YDL073WYDL073W 2955 nt1.11□□□□□ -2.23
SRD1P09007 BUD3YCL014W 4911 nt1.1□□□□□ -2.23
SRD1P09007 YNL284C-BYNL284C-B 5268 nt1.1□□□□□ -2.23
SRD1P09007 OST4YDL232W 111 nt1.09□□□□□ -2.23
SRD1P09007 tM(CAU)Q2tM(CAU)Q2 78 nt1.09□□□□□ -2.23
SRD1P09007 QCR9YGR183C 201 nt1.08□□□□□ -2.24
SRD1P09007 snR39BsnR39B 96 nt1.07□□□□□ -2.24
SRD1P09007 COG6YNL041C 2520 nt1.07□□□□□ -2.24
SRD1P09007 YNL067W-BYNL067W-B 141 nt1.06□□□□□ -2.24
SRD1P09007 YPR117WYPR117W 7470 nt1.04□□□□□ -2.24
SRD1P09007 YDR524C-AYDR524C-A 120 nt1.04□□□□□ -2.24
SRD1P09007 YNL103W-AYNL103W-A 90 nt1.04□□□□□ -2.24
SRD1P09007 YBR178WYBR178W 375 nt1.04□□□□□ -2.24
SRD1P09007 BEM2YER155C 6504 nt1.03□□□□□ -2.24
SRD1P09007 RKR1YMR247C 4689 nt1.02□□□□□ -2.25
SRD1P09007 ULP2YIL031W 3105 nt1.02□□□□□ -2.25
SRD1P09007 RCO1YMR075W 2055 nt1.01□□□□□ -2.25
SRD1P09007 YCR095W-AYCR095W-A 159 nt1.01□□□□□ -2.25
SRD1P09007 PMP2YEL017C-A 132 nt1.01□□□□□ -2.25
SRD1P09007 YBR072C-AYBR072C-A 162 nt1.01□□□□□ -2.25
SRD1P09007 GLG1YKR058W 1851 nt1.01□□□□□ -2.25
SRD1P09007 LTE1YAL024C 4308 nt1□□□□□ -2.25
SRD1P09007 TFB5YDR079C-A 219 nt0.99□□□□□ -2.25
SRD1P09007 YDR210WYDR210W 228 nt0.99□□□□□ -2.25
SRD1P09007 YBR099CYBR099C 384 nt0.99□□□□□ -2.25
SRD1P09007 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
SRD1P09007 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
SRD1P09007 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
SRD1P09007 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
SRD1P09007 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
SRD1P09007 YJL127W-AYJL127W-A 117 nt0.98□□□□□ -2.25
SRD1P09007 PAU24YBR301W 363 nt0.98□□□□□ -2.25
SRD1P09007 VAM6YDL077C 3150 nt0.97□□□□□ -2.25
SRD1P09007 YGR146C-AYGR146C-A 162 nt0.96□□□□□ -2.26
SRD1P09007 NNF2YGR089W 2811 nt0.96□□□□□ -2.26
SRD1P09007 SEC1YDR164C 2175 nt0.96□□□□□ -2.26
SRD1P09007 YLL006W-AYLL006W-A 177 nt0.95□□□□□ -2.26
SRD1P09007 SOM1YEL059C-A 225 nt0.94□□□□□ -2.26
SRD1P09007 YIL142C-AYIL142C-A 333 nt0.94□□□□□ -2.26
SRD1P09007 YJR029WYJR029W 5268 nt0.94□□□□□ -2.26
SRD1P09007 YPR137C-BYPR137C-B 5268 nt0.94□□□□□ -2.26
SRD1P09007 snR61snR61 90 nt0.89□□□□□ -2.27
SRD1P09007 YHR217CYHR217C 462 nt0.89□□□□□ -2.27
SRD1P09007 PET111YMR257C 2403 nt0.87□□□□□ -2.27
SRD1P09007 YGL041C-BYGL041C-B 183 nt0.87□□□□□ -2.27
SRD1P09007 YMR326CYMR326C 309 nt0.87□□□□□ -2.27
SRD1P09007 DOP1YDR141C 5097 nt0.87□□□□□ -2.27
SRD1P09007 CSE1YGL238W 2883 nt0.84□□□□□ -2.27
SRD1P09007 NIP1YMR309C 2439 nt0.84□□□□□ -2.28
SRD1P09007 YOR192C-BYOR192C-B 5313 nt0.83□□□□□ -2.28
SRD1P09007 YNL054W-BYNL054W-B 5250 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms