Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.24■□□□□ 0.99
RB1P06400 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.24■□□□□ 0.99
RB1P06400 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RB1P06400 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
RB1P06400 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RB1P06400 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RB1P06400 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RB1P06400 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RB1P06400 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RB1P06400 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.23■□□□□ 0.99
RB1P06400 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RB1P06400 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RB1P06400 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.23■□□□□ 0.99
RB1P06400 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RB1P06400 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RB1P06400 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RB1P06400 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.23■□□□□ 0.99
RB1P06400 WWOX-216ENST00000569818 525 ntBASIC21.23■□□□□ 0.99
RB1P06400 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RB1P06400 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.23■□□□□ 0.99
RB1P06400 AC006011.2-201ENST00000621313 1158 ntBASIC21.23■□□□□ 0.99
RB1P06400 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RB1P06400 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.23■□□□□ 0.99
RB1P06400 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.23■□□□□ 0.99
RB1P06400 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.22■□□□□ 0.99
RB1P06400 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RB1P06400 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RB1P06400 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RB1P06400 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.22■□□□□ 0.99
RB1P06400 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.22■□□□□ 0.99
RB1P06400 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.22■□□□□ 0.99
RB1P06400 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RB1P06400 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RB1P06400 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RB1P06400 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RB1P06400 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RB1P06400 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RB1P06400 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RB1P06400 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RB1P06400 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.21■□□□□ 0.99
RB1P06400 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.21■□□□□ 0.99
RB1P06400 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RB1P06400 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RB1P06400 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RB1P06400 BX664615.1-201ENST00000443558 458 ntBASIC21.21■□□□□ 0.99
RB1P06400 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RB1P06400 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RB1P06400 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.21■□□□□ 0.99
RB1P06400 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RB1P06400 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RB1P06400 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.21■□□□□ 0.99
RB1P06400 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.21■□□□□ 0.99
RB1P06400 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RB1P06400 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RB1P06400 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RB1P06400 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RB1P06400 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.2■□□□□ 0.98
RB1P06400 AP006587.1-201ENST00000534129 1502 ntBASIC21.2■□□□□ 0.98
RB1P06400 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RB1P06400 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
RB1P06400 GUSBP5-202ENST00000510805 1989 ntBASIC21.2■□□□□ 0.98
RB1P06400 ECEL1P2-202ENST00000465689 757 ntBASIC21.2■□□□□ 0.98
RB1P06400 B3GAT3P1-201ENST00000471720 806 ntBASIC21.2■□□□□ 0.98
RB1P06400 LINC01238-205ENST00000567549 1107 ntBASIC21.2■□□□□ 0.98
RB1P06400 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.2■□□□□ 0.98
RB1P06400 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RB1P06400 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RB1P06400 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
RB1P06400 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RB1P06400 KRT8P17-201ENST00000453110 1448 ntBASIC21.2■□□□□ 0.98
RB1P06400 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.2■□□□□ 0.98
RB1P06400 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.19■□□□□ 0.98
RB1P06400 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
RB1P06400 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.19■□□□□ 0.98
RB1P06400 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.19■□□□□ 0.98
RB1P06400 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RB1P06400 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RB1P06400 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.18■□□□□ 0.98
RB1P06400 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RB1P06400 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
RB1P06400 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RB1P06400 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RB1P06400 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.18■□□□□ 0.98
RB1P06400 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.18■□□□□ 0.98
RB1P06400 AC097488.1-201ENST00000507834 756 ntBASIC21.18■□□□□ 0.98
RB1P06400 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RB1P06400 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
RB1P06400 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RB1P06400 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RB1P06400 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms