Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.27■□□□□ 0.52
P04436 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04436 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P04436 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
P04436 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04436 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P04436 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04436 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04436 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04436 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.27■□□□□ 0.52
P04436 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04436 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.27■□□□□ 0.52
P04436 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.27■□□□□ 0.52
P04436 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.27■□□□□ 0.52
P04436 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.27■□□□□ 0.52
P04436 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.27■□□□□ 0.52
P04436 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.27■□□□□ 0.52
P04436 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04436 AL121829.2-201ENST00000620908 328 ntBASIC18.27■□□□□ 0.52
P04436 AL121906.2-201ENST00000621597 723 ntBASIC18.27■□□□□ 0.52
P04436 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.27■□□□□ 0.52
P04436 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.27■□□□□ 0.52
P04436 AL023875.1-201ENST00000640777 796 ntBASIC18.27■□□□□ 0.52
P04436 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
P04436 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
P04436 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04436 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.26■□□□□ 0.51
P04436 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04436 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
P04436 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
P04436 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.26■□□□□ 0.51
P04436 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04436 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P04436 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
P04436 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.26■□□□□ 0.51
P04436 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.26■□□□□ 0.51
P04436 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
P04436 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.26■□□□□ 0.51
P04436 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.26■□□□□ 0.51
P04436 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.26■□□□□ 0.51
P04436 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P04436 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P04436 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.26■□□□□ 0.51
P04436 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.26■□□□□ 0.51
P04436 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
P04436 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04436 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04436 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P04436 KRT16P6-202ENST00000425692 1426 ntBASIC18.25■□□□□ 0.51
P04436 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.25■□□□□ 0.51
P04436 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P04436 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.25■□□□□ 0.51
P04436 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
P04436 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.25■□□□□ 0.51
P04436 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.25■□□□□ 0.51
P04436 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.25■□□□□ 0.51
P04436 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.25■□□□□ 0.51
P04436 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
P04436 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P04436 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04436 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P04436 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
P04436 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.25■□□□□ 0.51
P04436 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04436 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P04436 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.24■□□□□ 0.51
P04436 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 AC124283.5-201ENST00000624661 1809 ntBASIC18.24■□□□□ 0.51
P04436 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
P04436 KRASP1-201ENST00000407852 552 ntBASIC18.24■□□□□ 0.51
P04436 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.24■□□□□ 0.51
P04436 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.24■□□□□ 0.51
P04436 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
P04436 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.24■□□□□ 0.51
P04436 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.24■□□□□ 0.51
P04436 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
P04436 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
P04436 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.23■□□□□ 0.51
P04436 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.23■□□□□ 0.51
P04436 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
P04436 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
P04436 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.23■□□□□ 0.51
P04436 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
P04436 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms