Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.65■■□□□ 1.22
HMGCRP04035 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
HMGCRP04035 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HMGCRP04035 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
HMGCRP04035 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HMGCRP04035 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
HMGCRP04035 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.64■■□□□ 1.21
HMGCRP04035 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.64■■□□□ 1.21
HMGCRP04035 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 WDR88-203ENST00000592765 651 ntTSL 5 BASIC22.64■■□□□ 1.21
HMGCRP04035 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
HMGCRP04035 LINC00565-201ENST00000562710 2331 ntBASIC22.64■■□□□ 1.21
HMGCRP04035 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCRP04035 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.63■■□□□ 1.21
HMGCRP04035 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.63■■□□□ 1.21
HMGCRP04035 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.63■■□□□ 1.21
HMGCRP04035 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.63■■□□□ 1.21
HMGCRP04035 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.63■■□□□ 1.21
HMGCRP04035 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.63■■□□□ 1.21
HMGCRP04035 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.63■■□□□ 1.21
HMGCRP04035 AL031985.4-201ENST00000642138 673 ntBASIC22.63■■□□□ 1.21
HMGCRP04035 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.63■■□□□ 1.21
HMGCRP04035 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.63■■□□□ 1.21
HMGCRP04035 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCRP04035 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.62■■□□□ 1.21
HMGCRP04035 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCRP04035 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.62■■□□□ 1.21
HMGCRP04035 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCRP04035 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCRP04035 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.62■■□□□ 1.21
HMGCRP04035 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
HMGCRP04035 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCRP04035 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.62■■□□□ 1.21
HMGCRP04035 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCRP04035 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCRP04035 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCRP04035 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCRP04035 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
HMGCRP04035 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCRP04035 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.61■■□□□ 1.21
HMGCRP04035 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.61■■□□□ 1.21
HMGCRP04035 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
HMGCRP04035 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCRP04035 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCRP04035 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCRP04035 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.61■■□□□ 1.21
HMGCRP04035 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCRP04035 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCRP04035 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.61■■□□□ 1.21
HMGCRP04035 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.61■■□□□ 1.21
HMGCRP04035 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.61■■□□□ 1.21
HMGCRP04035 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCRP04035 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.61■■□□□ 1.21
HMGCRP04035 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.61■■□□□ 1.21
HMGCRP04035 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.61■■□□□ 1.21
HMGCRP04035 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCRP04035 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
HMGCRP04035 AC027702.1-201ENST00000563810 1770 ntBASIC22.61■■□□□ 1.21
HMGCRP04035 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.6■■□□□ 1.21
HMGCRP04035 FSCN1P1-201ENST00000568912 1481 ntBASIC22.6■■□□□ 1.21
HMGCRP04035 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
HMGCRP04035 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCRP04035 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.6■■□□□ 1.21
HMGCRP04035 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.6■■□□□ 1.21
HMGCRP04035 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCRP04035 HLA-G-202ENST00000376815 851 ntBASIC22.6■■□□□ 1.21
HMGCRP04035 HLA-G-203ENST00000376818 1127 ntBASIC22.6■■□□□ 1.21
HMGCRP04035 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.6■■□□□ 1.21
HMGCRP04035 EGLN1P1-201ENST00000531623 762 ntBASIC22.6■■□□□ 1.21
HMGCRP04035 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC22.6■■□□□ 1.21
HMGCRP04035 AC026271.3-201ENST00000571884 352 ntBASIC22.6■■□□□ 1.21
HMGCRP04035 AP005242.2-201ENST00000580065 1175 ntBASIC22.6■■□□□ 1.21
HMGCRP04035 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.6■■□□□ 1.21
HMGCRP04035 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HMGCRP04035 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.6■■□□□ 1.21
HMGCRP04035 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCRP04035 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HMGCRP04035 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms