Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.34■□□□□ 0.69
KRT6AP02538 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.34■□□□□ 0.69
KRT6AP02538 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT6AP02538 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT6AP02538 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.34■□□□□ 0.69
KRT6AP02538 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT6AP02538 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.34■□□□□ 0.69
KRT6AP02538 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRT6AP02538 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KRT6AP02538 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KRT6AP02538 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
KRT6AP02538 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
KRT6AP02538 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT6AP02538 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT6AP02538 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRT6AP02538 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT6AP02538 AC007322.1-201ENST00000426983 750 ntBASIC19.33■□□□□ 0.68
KRT6AP02538 AL162430.1-201ENST00000480705 870 ntBASIC19.33■□□□□ 0.68
KRT6AP02538 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
KRT6AP02538 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.33■□□□□ 0.68
KRT6AP02538 AC105020.6-201ENST00000621523 1217 ntBASIC19.33■□□□□ 0.68
KRT6AP02538 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT6AP02538 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRT6AP02538 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT6AP02538 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.33■□□□□ 0.68
KRT6AP02538 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.33■□□□□ 0.68
KRT6AP02538 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.33■□□□□ 0.68
KRT6AP02538 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRT6AP02538 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT6AP02538 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT6AP02538 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT6AP02538 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT6AP02538 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 CYP2T1P-201ENST00000432607 1285 ntBASIC19.32■□□□□ 0.68
KRT6AP02538 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT6AP02538 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT6AP02538 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.32■□□□□ 0.68
KRT6AP02538 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.32■□□□□ 0.68
KRT6AP02538 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KRT6AP02538 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT6AP02538 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT6AP02538 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT6AP02538 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KRT6AP02538 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT6AP02538 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT6AP02538 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT6AP02538 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 CYP2T3P-201ENST00000601990 817 ntBASIC19.31■□□□□ 0.68
KRT6AP02538 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KRT6AP02538 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT6AP02538 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT6AP02538 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT6AP02538 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT6AP02538 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 PTBP1P-201ENST00000554374 1601 ntBASIC19.3■□□□□ 0.68
KRT6AP02538 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT6AP02538 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT6AP02538 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.3■□□□□ 0.68
KRT6AP02538 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT6AP02538 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT6AP02538 KRT8P17-201ENST00000453110 1448 ntBASIC19.3■□□□□ 0.68
KRT6AP02538 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KRT6AP02538 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
KRT6AP02538 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6AP02538 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.29■□□□□ 0.68
KRT6AP02538 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT6AP02538 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT6AP02538 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms