Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.95■■□□□ 1.26
ALDH1A1P00352 AC010653.2-201ENST00000623505 997 ntBASIC22.95■■□□□ 1.26
ALDH1A1P00352 AL031432.5-201ENST00000641059 760 ntBASIC22.95■■□□□ 1.26
ALDH1A1P00352 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ALDH1A1P00352 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
ALDH1A1P00352 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ALDH1A1P00352 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ALDH1A1P00352 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 SLC25A1P2-201ENST00000430693 912 ntBASIC22.94■■□□□ 1.26
ALDH1A1P00352 HOMER2P1-201ENST00000455653 964 ntBASIC22.94■■□□□ 1.26
ALDH1A1P00352 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 AC130371.2-201ENST00000619443 611 ntBASIC22.94■■□□□ 1.26
ALDH1A1P00352 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ALDH1A1P00352 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.94■■□□□ 1.26
ALDH1A1P00352 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ALDH1A1P00352 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.93■■□□□ 1.26
ALDH1A1P00352 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.93■■□□□ 1.26
ALDH1A1P00352 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
ALDH1A1P00352 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.93■■□□□ 1.26
ALDH1A1P00352 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ALDH1A1P00352 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ALDH1A1P00352 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ALDH1A1P00352 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ALDH1A1P00352 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ALDH1A1P00352 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.93■■□□□ 1.26
ALDH1A1P00352 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
ALDH1A1P00352 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.93■■□□□ 1.26
ALDH1A1P00352 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.93■■□□□ 1.26
ALDH1A1P00352 NDUFV2-AS1-203ENST00000608008 779 ntBASIC22.93■■□□□ 1.26
ALDH1A1P00352 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.93■■□□□ 1.26
ALDH1A1P00352 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ALDH1A1P00352 AL691432.3-201ENST00000621860 400 ntBASIC22.93■■□□□ 1.26
ALDH1A1P00352 AC093458.2-201ENST00000623150 629 ntBASIC22.93■■□□□ 1.26
ALDH1A1P00352 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ALDH1A1P00352 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ALDH1A1P00352 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ALDH1A1P00352 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.93■■□□□ 1.26
ALDH1A1P00352 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
ALDH1A1P00352 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.92■■□□□ 1.26
ALDH1A1P00352 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
ALDH1A1P00352 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ALDH1A1P00352 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.92■■□□□ 1.26
ALDH1A1P00352 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
ALDH1A1P00352 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.92■■□□□ 1.26
ALDH1A1P00352 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.92■■□□□ 1.26
ALDH1A1P00352 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
ALDH1A1P00352 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.92■■□□□ 1.26
ALDH1A1P00352 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.91■■□□□ 1.26
ALDH1A1P00352 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
ALDH1A1P00352 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ALDH1A1P00352 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
ALDH1A1P00352 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.91■■□□□ 1.26
ALDH1A1P00352 HCG4P8-203ENST00000443049 980 ntBASIC22.91■■□□□ 1.26
ALDH1A1P00352 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.91■■□□□ 1.26
ALDH1A1P00352 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ALDH1A1P00352 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.91■■□□□ 1.26
ALDH1A1P00352 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.91■■□□□ 1.26
ALDH1A1P00352 AL512604.3-201ENST00000569583 964 ntBASIC22.91■■□□□ 1.26
ALDH1A1P00352 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.91■■□□□ 1.26
ALDH1A1P00352 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ALDH1A1P00352 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ALDH1A1P00352 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ALDH1A1P00352 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ALDH1A1P00352 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ALDH1A1P00352 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
ALDH1A1P00352 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
ALDH1A1P00352 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ALDH1A1P00352 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ALDH1A1P00352 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 AC141257.4-201ENST00000634557 245 ntBASIC22.9■■□□□ 1.26
ALDH1A1P00352 AC136944.6-201ENST00000634818 245 ntBASIC22.9■■□□□ 1.26
ALDH1A1P00352 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ALDH1A1P00352 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ALDH1A1P00352 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ALDH1A1P00352 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ALDH1A1P00352 PTBP1P-201ENST00000554374 1601 ntBASIC22.9■■□□□ 1.26
ALDH1A1P00352 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
ALDH1A1P00352 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ALDH1A1P00352 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
ALDH1A1P00352 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms