Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 AL390719.1-204ENST00000412397 1219 ntBASIC19.9■□□□□ 0.78
PRAMEF1O95521 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEF1O95521 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
PRAMEF1O95521 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEF1O95521 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.9■□□□□ 0.78
PRAMEF1O95521 AC005829.2-201ENST00000571422 1056 ntBASIC19.9■□□□□ 0.78
PRAMEF1O95521 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEF1O95521 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.9■□□□□ 0.78
PRAMEF1O95521 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEF1O95521 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PRAMEF1O95521 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF1O95521 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
PRAMEF1O95521 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.89■□□□□ 0.77
PRAMEF1O95521 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.89■□□□□ 0.77
PRAMEF1O95521 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PRAMEF1O95521 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.89■□□□□ 0.77
PRAMEF1O95521 PNMA6B-201ENST00000538162 1200 ntBASIC19.89■□□□□ 0.77
PRAMEF1O95521 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.89■□□□□ 0.77
PRAMEF1O95521 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
PRAMEF1O95521 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.89■□□□□ 0.77
PRAMEF1O95521 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF1O95521 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 KRT16P6-202ENST00000425692 1426 ntBASIC19.88■□□□□ 0.77
PRAMEF1O95521 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 PCDHAC2-203ENST00000615316 3011 ntBASIC19.88■□□□□ 0.77
PRAMEF1O95521 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF1O95521 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PRAMEF1O95521 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.87■□□□□ 0.77
PRAMEF1O95521 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRAMEF1O95521 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRAMEF1O95521 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRAMEF1O95521 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms