Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC30.21■■■□□ 2.43
RAPGEF3O95398 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC30.21■■■□□ 2.43
RAPGEF3O95398 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RAPGEF3O95398 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
RAPGEF3O95398 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
RAPGEF3O95398 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RAPGEF3O95398 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC30.2■■■□□ 2.43
RAPGEF3O95398 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC30.2■■■□□ 2.43
RAPGEF3O95398 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
RAPGEF3O95398 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC30.2■■■□□ 2.43
RAPGEF3O95398 NDUFV2-AS1-203ENST00000608008 779 ntBASIC30.2■■■□□ 2.43
RAPGEF3O95398 AC116407.4-201ENST00000623319 1061 ntBASIC30.2■■■□□ 2.43
RAPGEF3O95398 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
RAPGEF3O95398 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC30.2■■■□□ 2.42
RAPGEF3O95398 AC005332.1-201ENST00000577698 1310 ntBASIC30.2■■■□□ 2.42
RAPGEF3O95398 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF3O95398 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF3O95398 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF3O95398 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 AC008040.2-201ENST00000461049 708 ntBASIC30.19■■■□□ 2.42
RAPGEF3O95398 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 CD81-212ENST00000526072 1172 ntTSL 5 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF3O95398 AC130371.2-201ENST00000619443 611 ntBASIC30.19■■■□□ 2.42
RAPGEF3O95398 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF3O95398 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF3O95398 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF3O95398 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF3O95398 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC30.19■■■□□ 2.42
RAPGEF3O95398 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
RAPGEF3O95398 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC30.18■■■□□ 2.42
RAPGEF3O95398 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC30.18■■■□□ 2.42
RAPGEF3O95398 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RAPGEF3O95398 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
RAPGEF3O95398 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC30.18■■■□□ 2.42
RAPGEF3O95398 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RAPGEF3O95398 AP000692.2-201ENST00000608391 879 ntBASIC30.18■■■□□ 2.42
RAPGEF3O95398 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC30.18■■■□□ 2.42
RAPGEF3O95398 MIR2861-201ENST00000636310 90 ntBASIC30.18■■■□□ 2.42
RAPGEF3O95398 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC30.18■■■□□ 2.42
RAPGEF3O95398 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
RAPGEF3O95398 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
RAPGEF3O95398 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RAPGEF3O95398 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC30.17■■■□□ 2.42
RAPGEF3O95398 AC141257.4-201ENST00000634557 245 ntBASIC30.17■■■□□ 2.42
RAPGEF3O95398 AC136944.6-201ENST00000634818 245 ntBASIC30.17■■■□□ 2.42
RAPGEF3O95398 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC30.17■■■□□ 2.42
RAPGEF3O95398 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC30.17■■■□□ 2.42
RAPGEF3O95398 AC116562.4-202ENST00000641738 218 ntBASIC30.17■■■□□ 2.42
RAPGEF3O95398 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC30.17■■■□□ 2.42
RAPGEF3O95398 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
RAPGEF3O95398 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RAPGEF3O95398 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RAPGEF3O95398 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
RAPGEF3O95398 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RAPGEF3O95398 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RAPGEF3O95398 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RAPGEF3O95398 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC30.16■■■□□ 2.42
RAPGEF3O95398 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RAPGEF3O95398 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
RAPGEF3O95398 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
RAPGEF3O95398 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RAPGEF3O95398 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
RAPGEF3O95398 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RAPGEF3O95398 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RAPGEF3O95398 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RAPGEF3O95398 AC246785.2-201ENST00000432512 513 ntBASIC30.15■■■□□ 2.42
RAPGEF3O95398 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC30.15■■■□□ 2.42
RAPGEF3O95398 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC30.15■■■□□ 2.42
RAPGEF3O95398 GPX4-207ENST00000589115 812 ntTSL 2 BASIC30.15■■■□□ 2.42
RAPGEF3O95398 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RAPGEF3O95398 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
RAPGEF3O95398 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RAPGEF3O95398 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RAPGEF3O95398 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC30.15■■■□□ 2.42
RAPGEF3O95398 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RAPGEF3O95398 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC30.14■■■□□ 2.42
RAPGEF3O95398 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RAPGEF3O95398 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RAPGEF3O95398 AC007663.1-201ENST00000438948 1240 ntBASIC30.14■■■□□ 2.42
RAPGEF3O95398 AL671277.2-201ENST00000458060 996 ntBASIC30.14■■■□□ 2.42
RAPGEF3O95398 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC30.14■■■□□ 2.42
RAPGEF3O95398 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
RAPGEF3O95398 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RAPGEF3O95398 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC30.14■■■□□ 2.42
RAPGEF3O95398 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
RAPGEF3O95398 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC30.14■■■□□ 2.42
RAPGEF3O95398 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.41
RAPGEF3O95398 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RAPGEF3O95398 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RAPGEF3O95398 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
RAPGEF3O95398 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC30.13■■■□□ 2.41
RAPGEF3O95398 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms