Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.68■□□□□ 0.42
ZNF254O75437 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ZNF254O75437 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF254O75437 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF254O75437 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF254O75437 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
ZNF254O75437 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZNF254O75437 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.67■□□□□ 0.42
ZNF254O75437 ZNRF2P3-201ENST00000424200 374 ntBASIC17.67■□□□□ 0.42
ZNF254O75437 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ZNF254O75437 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF254O75437 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF254O75437 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.67■□□□□ 0.42
ZNF254O75437 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.67■□□□□ 0.42
ZNF254O75437 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF254O75437 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZNF254O75437 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ZNF254O75437 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
ZNF254O75437 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF254O75437 BX323043.1-201ENST00000641006 1765 ntBASIC17.66■□□□□ 0.42
ZNF254O75437 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF254O75437 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF254O75437 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF254O75437 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF254O75437 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZNF254O75437 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF254O75437 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF254O75437 AC010536.3-201ENST00000620306 533 ntBASIC17.66■□□□□ 0.42
ZNF254O75437 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZNF254O75437 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF254O75437 AC018445.3-201ENST00000624177 1945 ntBASIC17.66■□□□□ 0.42
ZNF254O75437 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF254O75437 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF254O75437 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF254O75437 AC087289.5-201ENST00000586076 3175 ntBASIC17.66■□□□□ 0.42
ZNF254O75437 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZNF254O75437 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
ZNF254O75437 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF254O75437 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF254O75437 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZNF254O75437 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF254O75437 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
ZNF254O75437 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF254O75437 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ZNF254O75437 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 KRT18P11-201ENST00000435214 1283 ntBASIC17.65■□□□□ 0.42
ZNF254O75437 KRT18P61-201ENST00000585825 1298 ntBASIC17.65■□□□□ 0.42
ZNF254O75437 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF254O75437 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF254O75437 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZNF254O75437 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.64■□□□□ 0.42
ZNF254O75437 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF254O75437 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF254O75437 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF254O75437 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF254O75437 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF254O75437 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF254O75437 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF254O75437 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
ZNF254O75437 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ZNF254O75437 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.64■□□□□ 0.41
ZNF254O75437 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF254O75437 AC007322.4-201ENST00000509611 723 ntBASIC17.64■□□□□ 0.41
ZNF254O75437 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
ZNF254O75437 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF254O75437 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ZNF254O75437 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms