Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYNCRIPO60506 KRASP1-201ENST00000407852 552 ntBASIC20.42■□□□□ 0.86
SYNCRIPO60506 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.42■□□□□ 0.86
SYNCRIPO60506 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.42■□□□□ 0.86
SYNCRIPO60506 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SYNCRIPO60506 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.42■□□□□ 0.86
SYNCRIPO60506 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.42■□□□□ 0.86
SYNCRIPO60506 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.42■□□□□ 0.86
SYNCRIPO60506 AC110285.5-201ENST00000611501 352 ntBASIC20.42■□□□□ 0.86
SYNCRIPO60506 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.42■□□□□ 0.86
SYNCRIPO60506 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SYNCRIPO60506 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYNCRIPO60506 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SYNCRIPO60506 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SYNCRIPO60506 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SYNCRIPO60506 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SYNCRIPO60506 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SYNCRIPO60506 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 SNORA78-201ENST00000459373 127 ntBASIC20.41■□□□□ 0.86
SYNCRIPO60506 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
SYNCRIPO60506 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYNCRIPO60506 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNCRIPO60506 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNCRIPO60506 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYNCRIPO60506 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNCRIPO60506 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNCRIPO60506 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNCRIPO60506 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNCRIPO60506 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.4■□□□□ 0.86
SYNCRIPO60506 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNCRIPO60506 AC023632.3-201ENST00000521633 145 ntBASIC20.4■□□□□ 0.86
SYNCRIPO60506 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNCRIPO60506 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNCRIPO60506 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNCRIPO60506 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCRIPO60506 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.39■□□□□ 0.85
SYNCRIPO60506 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SYNCRIPO60506 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCRIPO60506 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SYNCRIPO60506 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.39■□□□□ 0.85
SYNCRIPO60506 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.39■□□□□ 0.85
SYNCRIPO60506 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.39■□□□□ 0.85
SYNCRIPO60506 AP001412.1-201ENST00000608405 714 ntBASIC20.39■□□□□ 0.85
SYNCRIPO60506 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SYNCRIPO60506 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCRIPO60506 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCRIPO60506 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNCRIPO60506 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCRIPO60506 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
SYNCRIPO60506 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCRIPO60506 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNCRIPO60506 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCRIPO60506 AL135905.2-201ENST00000584934 1404 ntBASIC20.38■□□□□ 0.85
SYNCRIPO60506 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNCRIPO60506 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNCRIPO60506 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCRIPO60506 AC012618.2-201ENST00000428058 849 ntBASIC20.38■□□□□ 0.85
SYNCRIPO60506 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCRIPO60506 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SYNCRIPO60506 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNCRIPO60506 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCRIPO60506 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.38■□□□□ 0.85
SYNCRIPO60506 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCRIPO60506 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCRIPO60506 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNCRIPO60506 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCRIPO60506 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNCRIPO60506 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SYNCRIPO60506 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.37■□□□□ 0.85
SYNCRIPO60506 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCRIPO60506 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCRIPO60506 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms