Protein–RNA interactions for Protein: O60291

MGRN1, E3 ubiquitin-protein ligase MGRN1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1O60291 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MGRN1O60291 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
MGRN1O60291 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.43■□□□□ 0.7
MGRN1O60291 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MGRN1O60291 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.43■□□□□ 0.7
MGRN1O60291 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MGRN1O60291 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MGRN1O60291 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MGRN1O60291 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MGRN1O60291 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.43■□□□□ 0.7
MGRN1O60291 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
MGRN1O60291 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.43■□□□□ 0.7
MGRN1O60291 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
MGRN1O60291 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MGRN1O60291 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
MGRN1O60291 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.42■□□□□ 0.7
MGRN1O60291 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 AC099791.2-201ENST00000605725 427 ntBASIC19.42■□□□□ 0.7
MGRN1O60291 AC131212.1-201ENST00000613771 668 ntBASIC19.42■□□□□ 0.7
MGRN1O60291 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.42■□□□□ 0.7
MGRN1O60291 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.42■□□□□ 0.7
MGRN1O60291 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.42■□□□□ 0.7
MGRN1O60291 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MGRN1O60291 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
MGRN1O60291 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MGRN1O60291 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MGRN1O60291 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.41■□□□□ 0.7
MGRN1O60291 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.41■□□□□ 0.7
MGRN1O60291 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
MGRN1O60291 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.41■□□□□ 0.7
MGRN1O60291 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.41■□□□□ 0.7
MGRN1O60291 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.41■□□□□ 0.7
MGRN1O60291 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 AC139713.2-201ENST00000641328 2723 ntBASIC19.41■□□□□ 0.7
MGRN1O60291 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.41■□□□□ 0.7
MGRN1O60291 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.41■□□□□ 0.7
MGRN1O60291 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MGRN1O60291 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.41■□□□□ 0.7
MGRN1O60291 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MGRN1O60291 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
MGRN1O60291 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.41■□□□□ 0.7
MGRN1O60291 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
MGRN1O60291 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MGRN1O60291 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MGRN1O60291 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MGRN1O60291 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.4■□□□□ 0.7
MGRN1O60291 AC006455.2-201ENST00000429931 906 ntBASIC19.4■□□□□ 0.7
MGRN1O60291 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.4■□□□□ 0.7
MGRN1O60291 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.4■□□□□ 0.7
MGRN1O60291 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MGRN1O60291 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MGRN1O60291 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MGRN1O60291 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MGRN1O60291 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.4■□□□□ 0.7
MGRN1O60291 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MGRN1O60291 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MGRN1O60291 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.4■□□□□ 0.7
MGRN1O60291 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.4■□□□□ 0.7
MGRN1O60291 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MGRN1O60291 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MGRN1O60291 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MGRN1O60291 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.39■□□□□ 0.7
MGRN1O60291 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MGRN1O60291 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
MGRN1O60291 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
MGRN1O60291 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MGRN1O60291 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
MGRN1O60291 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MGRN1O60291 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MGRN1O60291 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms