Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 AF201337.1-201ENST00000520239 748 ntBASIC17.64■□□□□ 0.41
SGCEO43556 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.64■□□□□ 0.41
SGCEO43556 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SGCEO43556 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SGCEO43556 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.64■□□□□ 0.41
SGCEO43556 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.64■□□□□ 0.41
SGCEO43556 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.64■□□□□ 0.41
SGCEO43556 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.64■□□□□ 0.41
SGCEO43556 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SGCEO43556 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SGCEO43556 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.63■□□□□ 0.41
SGCEO43556 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGCEO43556 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.63■□□□□ 0.41
SGCEO43556 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGCEO43556 AC099778.1-201ENST00000568593 1911 ntBASIC17.63■□□□□ 0.41
SGCEO43556 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGCEO43556 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SGCEO43556 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.63■□□□□ 0.41
SGCEO43556 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SGCEO43556 AC006970.2-201ENST00000450065 779 ntBASIC17.63■□□□□ 0.41
SGCEO43556 AC105036.2-201ENST00000569468 176 ntBASIC17.63■□□□□ 0.41
SGCEO43556 AL050303.2-201ENST00000619798 666 ntBASIC17.63■□□□□ 0.41
SGCEO43556 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGCEO43556 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.63■□□□□ 0.41
SGCEO43556 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.62■□□□□ 0.41
SGCEO43556 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.62■□□□□ 0.41
SGCEO43556 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 CROCCP5-201ENST00000436658 830 ntBASIC17.62■□□□□ 0.41
SGCEO43556 AC092666.2-201ENST00000613287 246 ntBASIC17.62■□□□□ 0.41
SGCEO43556 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.62■□□□□ 0.41
SGCEO43556 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.62■□□□□ 0.41
SGCEO43556 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.62■□□□□ 0.41
SGCEO43556 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.62■□□□□ 0.41
SGCEO43556 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 MKRN4P-201ENST00000444706 1521 ntBASIC17.62■□□□□ 0.41
SGCEO43556 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGCEO43556 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SGCEO43556 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SGCEO43556 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SGCEO43556 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SGCEO43556 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.61■□□□□ 0.41
SGCEO43556 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.61■□□□□ 0.41
SGCEO43556 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.61■□□□□ 0.41
SGCEO43556 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SGCEO43556 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SGCEO43556 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SGCEO43556 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.61■□□□□ 0.41
SGCEO43556 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SGCEO43556 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGCEO43556 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SGCEO43556 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SGCEO43556 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGCEO43556 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SGCEO43556 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGCEO43556 LSM12P1-201ENST00000411836 588 ntBASIC17.6■□□□□ 0.41
SGCEO43556 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SGCEO43556 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.6■□□□□ 0.41
SGCEO43556 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.6■□□□□ 0.41
SGCEO43556 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.6■□□□□ 0.41
SGCEO43556 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.6■□□□□ 0.41
SGCEO43556 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.6■□□□□ 0.41
SGCEO43556 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.6■□□□□ 0.41
SGCEO43556 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.6■□□□□ 0.41
SGCEO43556 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SGCEO43556 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.6■□□□□ 0.41
SGCEO43556 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.6■□□□□ 0.41
SGCEO43556 KRT17P1-201ENST00000399211 1546 ntBASIC17.6■□□□□ 0.41
SGCEO43556 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.6■□□□□ 0.41
SGCEO43556 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SGCEO43556 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms