Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.78■□□□□ 0.92
MSI1O43347 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.78■□□□□ 0.92
MSI1O43347 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.78■□□□□ 0.92
MSI1O43347 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.78■□□□□ 0.92
MSI1O43347 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MSI1O43347 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.78■□□□□ 0.92
MSI1O43347 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
MSI1O43347 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MSI1O43347 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
MSI1O43347 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSI1O43347 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
MSI1O43347 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSI1O43347 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSI1O43347 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.77■□□□□ 0.92
MSI1O43347 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSI1O43347 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MSI1O43347 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSI1O43347 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.77■□□□□ 0.92
MSI1O43347 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.77■□□□□ 0.92
MSI1O43347 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MSI1O43347 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSI1O43347 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSI1O43347 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MSI1O43347 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MSI1O43347 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MSI1O43347 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MSI1O43347 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
MSI1O43347 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSI1O43347 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSI1O43347 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MSI1O43347 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MSI1O43347 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MSI1O43347 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MSI1O43347 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSI1O43347 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.76■□□□□ 0.91
MSI1O43347 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSI1O43347 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MSI1O43347 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.76■□□□□ 0.91
MSI1O43347 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.76■□□□□ 0.91
MSI1O43347 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MSI1O43347 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MSI1O43347 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.76■□□□□ 0.91
MSI1O43347 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSI1O43347 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.75■□□□□ 0.91
MSI1O43347 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSI1O43347 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.75■□□□□ 0.91
MSI1O43347 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.75■□□□□ 0.91
MSI1O43347 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MSI1O43347 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.75■□□□□ 0.91
MSI1O43347 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.75■□□□□ 0.91
MSI1O43347 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSI1O43347 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.75■□□□□ 0.91
MSI1O43347 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.75■□□□□ 0.91
MSI1O43347 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSI1O43347 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSI1O43347 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.75■□□□□ 0.91
MSI1O43347 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.75■□□□□ 0.91
MSI1O43347 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSI1O43347 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.75■□□□□ 0.91
MSI1O43347 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MSI1O43347 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.75■□□□□ 0.91
MSI1O43347 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.74■□□□□ 0.91
MSI1O43347 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
MSI1O43347 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
MSI1O43347 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.74■□□□□ 0.91
MSI1O43347 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
MSI1O43347 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
MSI1O43347 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.74■□□□□ 0.91
MSI1O43347 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
MSI1O43347 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.74■□□□□ 0.91
MSI1O43347 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
MSI1O43347 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
MSI1O43347 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.74■□□□□ 0.91
MSI1O43347 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSI1O43347 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.74■□□□□ 0.91
MSI1O43347 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.74■□□□□ 0.91
MSI1O43347 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MSI1O43347 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSI1O43347 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
MSI1O43347 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.73■□□□□ 0.91
MSI1O43347 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSI1O43347 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
MSI1O43347 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MSI1O43347 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSI1O43347 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
MSI1O43347 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms