Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RRP8O43159 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.84■□□□□ 0.61
RRP8O43159 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RRP8O43159 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
RRP8O43159 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.84■□□□□ 0.61
RRP8O43159 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.84■□□□□ 0.61
RRP8O43159 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RRP8O43159 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RRP8O43159 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RRP8O43159 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RRP8O43159 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.84■□□□□ 0.61
RRP8O43159 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RRP8O43159 AC124283.5-201ENST00000624661 1809 ntBASIC18.84■□□□□ 0.61
RRP8O43159 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RRP8O43159 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RRP8O43159 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RRP8O43159 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RRP8O43159 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.83■□□□□ 0.61
RRP8O43159 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.83■□□□□ 0.6
RRP8O43159 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.83■□□□□ 0.6
RRP8O43159 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.83■□□□□ 0.6
RRP8O43159 AC022616.7-201ENST00000525383 220 ntBASIC18.83■□□□□ 0.6
RRP8O43159 EGLN1P1-201ENST00000531623 762 ntBASIC18.83■□□□□ 0.6
RRP8O43159 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.83■□□□□ 0.6
RRP8O43159 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.83■□□□□ 0.6
RRP8O43159 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.83■□□□□ 0.6
RRP8O43159 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RRP8O43159 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RRP8O43159 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RRP8O43159 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.82■□□□□ 0.6
RRP8O43159 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RRP8O43159 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RRP8O43159 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.82■□□□□ 0.6
RRP8O43159 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.82■□□□□ 0.6
RRP8O43159 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RRP8O43159 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RRP8O43159 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.82■□□□□ 0.6
RRP8O43159 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.82■□□□□ 0.6
RRP8O43159 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RRP8O43159 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RRP8O43159 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.82■□□□□ 0.6
RRP8O43159 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RRP8O43159 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.81■□□□□ 0.6
RRP8O43159 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
RRP8O43159 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.81■□□□□ 0.6
RRP8O43159 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.81■□□□□ 0.6
RRP8O43159 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.81■□□□□ 0.6
RRP8O43159 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.81■□□□□ 0.6
RRP8O43159 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.81■□□□□ 0.6
RRP8O43159 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 AL121894.2-201ENST00000602977 491 ntBASIC18.81■□□□□ 0.6
RRP8O43159 AL031985.4-201ENST00000642138 673 ntBASIC18.81■□□□□ 0.6
RRP8O43159 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RRP8O43159 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.81■□□□□ 0.6
RRP8O43159 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RRP8O43159 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.81■□□□□ 0.6
RRP8O43159 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.8■□□□□ 0.6
RRP8O43159 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.8■□□□□ 0.6
RRP8O43159 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.8■□□□□ 0.6
RRP8O43159 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 FSCN1P1-201ENST00000568912 1481 ntBASIC18.8■□□□□ 0.6
RRP8O43159 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.8■□□□□ 0.6
RRP8O43159 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.8■□□□□ 0.6
RRP8O43159 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.8■□□□□ 0.6
RRP8O43159 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.8■□□□□ 0.6
RRP8O43159 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RRP8O43159 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RRP8O43159 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RRP8O43159 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms