Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.19■□□□□ 0.82
AP3B1O00203 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.19■□□□□ 0.82
AP3B1O00203 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
AP3B1O00203 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
AP3B1O00203 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.19■□□□□ 0.82
AP3B1O00203 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.19■□□□□ 0.82
AP3B1O00203 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
AP3B1O00203 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.19■□□□□ 0.82
AP3B1O00203 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.19■□□□□ 0.82
AP3B1O00203 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
AP3B1O00203 C2orf69P4-201ENST00000565394 541 ntBASIC20.19■□□□□ 0.82
AP3B1O00203 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.19■□□□□ 0.82
AP3B1O00203 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 AC009237.14-201ENST00000609975 1594 ntBASIC20.19■□□□□ 0.82
AP3B1O00203 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
AP3B1O00203 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.18■□□□□ 0.82
AP3B1O00203 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.18■□□□□ 0.82
AP3B1O00203 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.18■□□□□ 0.82
AP3B1O00203 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.18■□□□□ 0.82
AP3B1O00203 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.18■□□□□ 0.82
AP3B1O00203 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.18■□□□□ 0.82
AP3B1O00203 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
AP3B1O00203 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.18■□□□□ 0.82
AP3B1O00203 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.18■□□□□ 0.82
AP3B1O00203 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP3B1O00203 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
AP3B1O00203 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3B1O00203 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3B1O00203 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3B1O00203 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
AP3B1O00203 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3B1O00203 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.17■□□□□ 0.82
AP3B1O00203 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP3B1O00203 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
AP3B1O00203 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.17■□□□□ 0.82
AP3B1O00203 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP3B1O00203 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
AP3B1O00203 AP001271.2-201ENST00000624018 1556 ntBASIC20.17■□□□□ 0.82
AP3B1O00203 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 AL355472.2-201ENST00000422958 438 ntBASIC20.16■□□□□ 0.82
AP3B1O00203 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.16■□□□□ 0.82
AP3B1O00203 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.16■□□□□ 0.82
AP3B1O00203 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.16■□□□□ 0.82
AP3B1O00203 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.16■□□□□ 0.82
AP3B1O00203 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.16■□□□□ 0.82
AP3B1O00203 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.16■□□□□ 0.82
AP3B1O00203 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.16■□□□□ 0.82
AP3B1O00203 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
AP3B1O00203 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP3B1O00203 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
AP3B1O00203 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP3B1O00203 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
AP3B1O00203 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms