Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 AC112907.3-201ENST00000577781 2400 ntBASIC22.37■■□□□ 1.17
SPDYE4A6NLX3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 BX323043.1-201ENST00000641006 1765 ntBASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPDYE4A6NLX3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 RARRES2P4-201ENST00000514074 484 ntBASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 AC092118.2-201ENST00000613495 667 ntBASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPDYE4A6NLX3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 POU5F1P4-201ENST00000413175 1085 ntBASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 AC097658.1-201ENST00000475555 843 ntBASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SPDYE4A6NLX3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 NEFHP1-201ENST00000412845 2629 ntBASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SPDYE4A6NLX3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.33■■□□□ 1.16
SPDYE4A6NLX3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SPDYE4A6NLX3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SPDYE4A6NLX3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.33■■□□□ 1.16
SPDYE4A6NLX3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
SPDYE4A6NLX3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms