Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 AL353708.3-201ENST00000610272 989 ntBASIC17.63■□□□□ 0.41
MBD3L3A6NE82 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.63■□□□□ 0.41
MBD3L3A6NE82 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 AC073195.1-201ENST00000607241 877 ntBASIC17.62■□□□□ 0.41
MBD3L3A6NE82 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 REXO1L12P-201ENST00000622156 912 ntBASIC17.62■□□□□ 0.41
MBD3L3A6NE82 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MBD3L3A6NE82 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 CD177P1-201ENST00000606252 935 ntBASIC17.61■□□□□ 0.41
MBD3L3A6NE82 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.61■□□□□ 0.41
MBD3L3A6NE82 AC026471.5-201ENST00000615068 467 ntBASIC17.61■□□□□ 0.41
MBD3L3A6NE82 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 AC116351.2-201ENST00000606540 1585 ntBASIC17.61■□□□□ 0.41
MBD3L3A6NE82 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD3L3A6NE82 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD3L3A6NE82 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L3A6NE82 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L3A6NE82 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L3A6NE82 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L3A6NE82 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.59■□□□□ 0.41
MBD3L3A6NE82 AP006587.1-201ENST00000534129 1502 ntBASIC17.59■□□□□ 0.41
MBD3L3A6NE82 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L3A6NE82 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L3A6NE82 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms