Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 KRT8P17-201ENST00000453110 1448 ntBASIC22.04■■□□□ 1.12
TRIM49BA6NDI0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM49BA6NDI0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM49BA6NDI0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 OR10C1-204ENST00000622521 1039 ntBASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 AC073111.5-205ENST00000641717 521 ntBASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM49BA6NDI0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 AC080038.1-201ENST00000611274 1154 ntBASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 AL050303.2-201ENST00000619798 666 ntBASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.02■■□□□ 1.12
TRIM49BA6NDI0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
TRIM49BA6NDI0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TRIM49BA6NDI0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.01■■□□□ 1.11
TRIM49BA6NDI0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM49BA6NDI0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22■■□□□ 1.11
TRIM49BA6NDI0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22■■□□□ 1.11
TRIM49BA6NDI0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM49BA6NDI0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM49BA6NDI0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22■■□□□ 1.11
TRIM49BA6NDI0 MIR935-201ENST00000401179 91 ntBASIC22■■□□□ 1.11
TRIM49BA6NDI0 CDCA4P2-201ENST00000441182 718 ntBASIC22■■□□□ 1.11
TRIM49BA6NDI0 AL031963.3-201ENST00000606441 850 ntBASIC22■■□□□ 1.11
TRIM49BA6NDI0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM49BA6NDI0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22■■□□□ 1.11
TRIM49BA6NDI0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM49BA6NDI0 TREX1-205ENST00000625293 1783 ntBASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM49BA6NDI0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
TRIM49BA6NDI0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TRIM49BA6NDI0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms