Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TCRBV4S1A1TA0A5B7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TCRBV4S1A1TA0A5B7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC116050.2-201ENST00000612102 1779 ntBASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC112907.3-201ENST00000577781 2400 ntBASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ESRRAP1-201ENST00000400596 1257 ntBASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ITM2C-210ENST00000620962 501 ntBASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC007952.6-201ENST00000573168 2673 ntBASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 AC003957.1-201ENST00000625108 2673 ntBASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV4S1A1TA0A5B7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.02■□□□□ 0.16
TCRBV4S1A1TA0A5B7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.02■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms