Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 NUDT16P1-203ENST00000513809 620 ntBASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 AC012306.2-201ENST00000609350 630 ntBASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 AL121603.2-201ENST00000557373 2117 ntBASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV17A0A0B4J275 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 KSR1P1-201ENST00000446298 240 ntBASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 AC133561.1-201ENST00000568600 2415 ntBASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV17A0A0B4J275 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 AC010331.1-201ENST00000611423 582 ntBASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 FP700111.2-201ENST00000619190 1892 ntBASIC18.12■□□□□ 0.49
TRAV17A0A0B4J275 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 UNC93B2-201ENST00000285383 730 ntBASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 NIFKP9-201ENST00000419265 221 ntBASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV17A0A0B4J275 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 AP006587.1-201ENST00000534129 1502 ntBASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms