Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SF3A3P1-201ENST00000446317 1477 ntBASIC6.89□□□□□ -1.31
AMBRA1Q9C0C7 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
AMBRA1Q9C0C7 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
AMBRA1Q9C0C7 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
AMBRA1Q9C0C7 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
AMBRA1Q9C0C7 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
AMBRA1Q9C0C7 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
AMBRA1Q9C0C7 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
AMBRA1Q9C0C7 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 BIN2P2-201ENST00000503900 1303 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 NXT2-204ENST00000372107 937 ntTSL 3 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 GABARAPL3-201ENST00000412799 354 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 VN1R66P-201ENST00000412929 916 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC245047.1-201ENST00000433276 873 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 KIF3AP1-201ENST00000454055 611 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC018635.1-201ENST00000468292 1030 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC139272.1-201ENST00000505516 640 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC112225.1-201ENST00000508230 297 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC090539.2-201ENST00000523425 671 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC103855.4-201ENST00000533158 265 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC091304.5-201ENST00000568969 158 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC090415.1-201ENST00000581877 847 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 RN7SL25P-201ENST00000583862 260 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 MIR4642-201ENST00000583943 82 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC022387.2-201ENST00000604050 448 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC020765.1-201ENST00000604296 328 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 U47924.1-201ENST00000606539 434 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC006249.1-201ENST00000621223 471 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC233280.20-201ENST00000637412 416 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 AC125603.4-201ENST00000621942 2699 ntBASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
AMBRA1Q9C0C7 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 MTND4P21-201ENST00000453886 1357 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 RNU6-891P-201ENST00000384280 111 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 MSRB1P1-201ENST00000396851 354 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 RN7SKP89-201ENST00000410774 242 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 BMS1P12-201ENST00000428213 706 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AL354983.1-201ENST00000434580 906 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 RPS19P6-201ENST00000441327 433 ntBASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
AMBRA1Q9C0C7 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms