Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 MFSD8-256ENST00000641949 1640 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 RNA5SP172-201ENST00000365061 118 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 RN7SKP236-201ENST00000410635 284 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 SNX18P13-201ENST00000412442 529 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 RBM22P7-201ENST00000421321 280 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 FTLP17-201ENST00000432567 525 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 SNX18P9-201ENST00000440580 835 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 RPLP0P1-201ENST00000457002 361 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 NDUFB4P1-201ENST00000462398 381 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AC096708.2-201ENST00000577676 512 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 RN7SL42P-201ENST00000579786 294 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AC087893.2-201ENST00000623272 255 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AC073488.7-201ENST00000633785 778 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 AL391262.1-201ENST00000556558 1992 ntBASIC6.48□□□□□ -1.37
RSPO3Q9BXY4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC105114.1-201ENST00000624795 1862 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 NHP2P2-201ENST00000396362 460 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC068138.1-201ENST00000412635 217 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 EIF4A1P13-201ENST00000415667 230 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 UQCRHP1-204ENST00000424609 274 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 CHCHD3P1-201ENST00000425516 676 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 CYP4F34P-201ENST00000425951 481 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 PMS2P9-201ENST00000441237 515 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AL929410.2-201ENST00000451170 189 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC083806.1-201ENST00000468934 316 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 RN7SL705P-201ENST00000481678 294 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC079594.1-201ENST00000489757 331 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AP005202.1-201ENST00000489915 867 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 HNRNPA1P17-201ENST00000496620 924 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC139272.1-201ENST00000505516 640 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC008417.1-201ENST00000510014 565 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC068790.1-201ENST00000536166 355 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 GTF2IP6-201ENST00000583143 541 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC011471.4-201ENST00000638271 216 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 OR5AU1-204ENST00000641822 1197 ntBASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.47□□□□□ -1.37
RSPO3Q9BXY4 FADS2P1-201ENST00000611807 1446 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms