Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RBMY2JP-201ENST00000425544 1059 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AC231532.1-201ENST00000438584 312 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 RAD1P2-201ENST00000446414 663 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 DEFA11P-201ENST00000446470 261 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 RN7SL180P-201ENST00000466769 294 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 RN7SL89P-201ENST00000480252 283 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 RN7SL869P-201ENST00000497032 300 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AL137802.2-201ENST00000562878 1110 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 RBM22P13-201ENST00000569805 1244 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AC016542.1-201ENST00000608259 493 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AL121583.1-201ENST00000612444 682 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.75□□□□□ -1.33
SNX18Q96RF0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 AP000641.1-201ENST00000531988 1639 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNX18Q96RF0 ZNF658B-201ENST00000602828 3408 ntBASIC6.75□□□□□ -1.33
SNX18Q96RF0 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 MIR498-201ENST00000385134 124 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 KATNBL1P2-201ENST00000433311 835 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 ST13P2-201ENST00000438916 1109 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 AL137074.1-201ENST00000442640 465 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC114928.1-201ENST00000446516 415 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC092905.1-201ENST00000467527 949 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 RN7SL91P-201ENST00000469313 291 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 ALG13-214ENST00000482742 620 ntTSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC107956.2-201ENST00000496042 454 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 CAB39P1-201ENST00000502277 460 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 NPY6R-201ENST00000503807 1112 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC114801.1-201ENST00000512633 297 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 RN7SKP233-201ENST00000517005 110 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC100823.2-201ENST00000518337 699 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 NDUFA3P1-201ENST00000588007 252 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 BNIP3P39-201ENST00000601077 554 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 CR382285.1-202ENST00000604687 547 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 GMCL1P2-201ENST00000605230 823 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC012488.1-201ENST00000611221 640 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AP003400.2-201ENST00000624036 666 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms