Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 OR6L2P-201ENST00000608207 925 ntBASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 AC007938.1-201ENST00000562524 2902 ntBASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 AL157713.1-201ENST00000379752 1531 ntBASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC50Q8IVM0 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 RNU6-1055P-201ENST00000391085 107 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC113608.1-201ENST00000398740 305 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 GAPDHP46-201ENST00000424043 994 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC108039.2-201ENST00000440214 359 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 RN7SL325P-201ENST00000460434 283 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 OR7E83P-201ENST00000511021 970 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 ADI1P2-201ENST00000514945 429 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC005495.1-201ENST00000586611 1211 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC097376.1-201ENST00000602907 997 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC108451.2-201ENST00000603875 538 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AP000436.1-201ENST00000605239 800 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 RN7SL820P-201ENST00000616437 299 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 C18orf12-201ENST00000623329 537 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AL035563.1-201ENST00000609087 1539 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 AL033543.1-201ENST00000623440 13454 ntBASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC50Q8IVM0 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AL606490.2-201ENST00000457562 1330 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 FGG-204ENST00000405164 1539 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 CDY7P-201ENST00000429883 1604 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 FTOP1-201ENST00000419363 861 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 CYP4F32P-201ENST00000426492 504 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 HBBP1-201ENST00000433329 439 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AC000362.1-201ENST00000433725 425 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms