Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AL133320.1-201ENST00000621423 2352 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 NR1H5P-201ENST00000452683 1377 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AC093844.1-201ENST00000514910 1361 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 TRIM64EP-201ENST00000531233 1307 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 DDX10P2-201ENST00000417796 2614 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 SNORA70G-201ENST00000383923 142 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AL627308.2-201ENST00000420014 432 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 FDPSP1-201ENST00000424976 1071 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 PMS2P11-201ENST00000451831 574 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AL133480.2-201ENST00000456723 487 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 GLRXP3-201ENST00000470810 321 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AC114940.1-201ENST00000512162 1265 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 OR5F2P-201ENST00000532761 941 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 SIGLEC31P-201ENST00000594237 551 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPIPA3F8WFD2 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NPIPA3F8WFD2 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.59□□□□□ -1.36
NPIPA3F8WFD2 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NPIPA3F8WFD2 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NPIPA3F8WFD2 OR52K3P-202ENST00000641797 1729 ntBASIC6.59□□□□□ -1.36
NPIPA3F8WFD2 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NPIPA3F8WFD2 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.36
NPIPA3F8WFD2 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
NPIPA3F8WFD2 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 MFSD8-256ENST00000641949 1640 ntBASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPIPA3F8WFD2 FAUP2-201ENST00000394301 401 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms