Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC116553.2-201ENST00000564203 463 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC008626.1-201ENST00000604384 255 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC107075.1-201ENST00000613695 314 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC005796.1-201ENST00000623214 433 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 MIR193BHG-210ENST00000641327 515 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC100827.4-201ENST00000563464 2441 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 LAMC2-201ENST00000264144 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC087565.3-202ENST00000642085 1603 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 SCIMP-203ENST00000574081 2383 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 CEP63-201ENST00000332047 2056 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 ALOX12P2-210ENST00000574727 4326 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 FMO10P-201ENST00000455032 1493 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 GSN-AS1-201ENST00000414544 4763 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 SULT1C2P1-201ENST00000427208 1875 ntTSL 2 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 F11-202ENST00000264692 1916 ntTSL 2 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AP000446.1-201ENST00000530045 2643 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 SVILP1-201ENST00000422642 2676 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 MAJIN-201ENST00000301896 843 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 RNU6-907P-201ENST00000390924 102 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 METTL5-204ENST00000409340 472 ntTSL 5 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 CEACAMP8-201ENST00000413902 580 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 ATP5LP4-201ENST00000434169 307 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC016734.1-201ENST00000436998 654 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 PHKG1P1-201ENST00000442924 614 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 BX005266.3-201ENST00000443013 1075 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC092421.1-201ENST00000448148 418 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 FGF12-206ENST00000450716 768 ntTSL 5 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AL096803.1-201ENST00000456921 1021 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 CCNJP2-201ENST00000457810 1163 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC023245.1-201ENST00000468501 517 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 CCDC75P1-201ENST00000469247 791 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 OR11I1P-201ENST00000486033 954 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 RPL17P37-201ENST00000490729 548 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 MTCYBP18-201ENST00000501056 747 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AF186996.3-201ENST00000509527 964 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 RNU6-327P-201ENST00000516270 127 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC022217.3-201ENST00000523005 352 ntTSL 3 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AP001207.1-201ENST00000524051 481 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AP006296.1-201ENST00000537438 499 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCH3Q96II8 OR11J2P-201ENST00000555298 907 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC006530.1-201ENST00000555980 571 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 NDUFA5P11-201ENST00000567995 343 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC096708.2-201ENST00000577676 512 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC9.47□□□□□ -0.89
LRCH3Q96II8 AP001120.4-201ENST00000590231 108 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC119751.8-201ENST00000597032 156 ntBASIC9.47□□□□□ -0.89
LRCH3Q96II8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms