Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC8.61□□□□□ -1.03
FOXR1Q6PIV2 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC092111.1-201ENST00000618256 3358 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 RNU1-120P-201ENST00000363009 157 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 RNU4-68P-201ENST00000364314 141 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 RNU6-636P-201ENST00000384598 107 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 Y_RNA.553-201ENST00000384670 102 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 PCNAP3-201ENST00000397222 778 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AL590084.2-201ENST00000401481 382 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 BMP2KL-201ENST00000414251 1225 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AL645937.5-202ENST00000415595 944 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC092393.1-201ENST00000439625 742 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 RPL31P53-201ENST00000457065 348 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 DAP3P2-201ENST00000458547 510 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 CABYRP1-201ENST00000465493 1045 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 FABP5P7-201ENST00000524732 405 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC087633.1-201ENST00000554649 715 ntTSL 3 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC127024.5-201ENST00000580085 462 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC233702.11-201ENST00000598588 333 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AF146191.1-201ENST00000604941 889 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC073114.1-201ENST00000612027 490 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC215522.1-201ENST00000615488 446 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 BRCC3-210ENST00000630295 954 ntTSL 5 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AC009237.3-203ENST00000442128 3551 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 ASNSP1-202ENST00000641079 1352 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 CASC19-280ENST00000642102 1351 ntBASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
FOXR1Q6PIV2 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 MIR16-2-201ENST00000362117 81 ntBASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 RNA5SP250-201ENST00000362534 119 ntBASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 RNU5B-4P-201ENST00000363508 111 ntBASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 U3.17-201ENST00000390863 203 ntBASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 OSBPL10-AS1-201ENST00000417313 475 ntTSL 3 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 AC245047.5-201ENST00000437312 556 ntBASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 SNRPEP8-201ENST00000442866 260 ntBASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 AP000936.2-201ENST00000447151 681 ntBASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 AC104978.1-201ENST00000449387 391 ntBASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 ARAFP3-201ENST00000454154 490 ntBASIC8.59□□□□□ -1.03
FOXR1Q6PIV2 OSTCP1-201ENST00000455507 450 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms