Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.45□□□□□ -1.22
SLC1A1P43005 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SLC1A1P43005 AL589993.1-201ENST00000407450 2524 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SLC1A1P43005 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.45□□□□□ -1.22
SLC1A1P43005 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SLC1A1P43005 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7.45□□□□□ -1.22
SLC1A1P43005 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.45□□□□□ -1.22
SLC1A1P43005 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.45□□□□□ -1.22
SLC1A1P43005 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SLC1A1P43005 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
SLC1A1P43005 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.45□□□□□ -1.22
SLC1A1P43005 AC093799.1-201ENST00000452411 499 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 AC026254.2-201ENST00000475295 371 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 RPL7AP56-201ENST00000476420 791 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 RN7SL705P-201ENST00000481678 294 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 RPL5P3-201ENST00000493817 889 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.45□□□□□ -1.22
SLC1A1P43005 AC117383.2-201ENST00000514722 322 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
SLC1A1P43005 EGLN3P1-201ENST00000541727 720 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
SLC1A1P43005 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
SLC1A1P43005 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.45□□□□□ -1.22
SLC1A1P43005 BOLA2P1-201ENST00000584794 232 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 AP001120.4-201ENST00000590231 108 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 AC111186.1-201ENST00000604684 130 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 AC027271.1-201ENST00000610270 610 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 AC211433.3-201ENST00000623770 375 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.45□□□□□ -1.22
SLC1A1P43005 AC073488.7-201ENST00000633785 778 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.45□□□□□ -1.22
SLC1A1P43005 AC107980.1-201ENST00000558671 3355 ntBASIC7.45□□□□□ -1.22
SLC1A1P43005 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SLC1A1P43005 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SLC1A1P43005 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
SLC1A1P43005 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
SLC1A1P43005 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SLC1A1P43005 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SLC1A1P43005 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.45□□□□□ -1.22
SLC1A1P43005 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SLC1A1P43005 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SLC1A1P43005 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SLC1A1P43005 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SLC1A1P43005 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.44□□□□□ -1.22
SLC1A1P43005 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.44□□□□□ -1.22
SLC1A1P43005 DDX43P1-201ENST00000510713 1763 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.44□□□□□ -1.22
SLC1A1P43005 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 RNA5SP172-201ENST00000365061 118 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 SNORA51.7-201ENST00000384171 134 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 TAS2R2P-201ENST00000421146 910 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC7.44□□□□□ -1.22
SLC1A1P43005 OR5P4P-201ENST00000424698 917 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC7.44□□□□□ -1.22
SLC1A1P43005 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.44□□□□□ -1.22
SLC1A1P43005 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 RN7SL306P-201ENST00000492941 296 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.44□□□□□ -1.22
SLC1A1P43005 OR9L1P-201ENST00000529493 933 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 AC018523.1-201ENST00000534211 512 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 AC068790.1-201ENST00000536166 355 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC7.44□□□□□ -1.22
SLC1A1P43005 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.44□□□□□ -1.22
SLC1A1P43005 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 NDUFA3P4-201ENST00000560814 250 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.44□□□□□ -1.22
SLC1A1P43005 AC243312.1-201ENST00000570582 275 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 AC015674.1-201ENST00000578482 267 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 MIR4470-201ENST00000583453 72 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 RN7SL778P-201ENST00000607160 297 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.44□□□□□ -1.22
SLC1A1P43005 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC7.44□□□□□ -1.22
SLC1A1P43005 uc_338.37-201ENST00000620113 186 ntBASIC7.44□□□□□ -1.22
SLC1A1P43005 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SLC1A1P43005 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
SLC1A1P43005 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SLC1A1P43005 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.44□□□□□ -1.22
SLC1A1P43005 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms