Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 AL669831.5-218ENST00000591702 1873 ntBASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DRB4X5D2U9 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DRB4X5D2U9 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DRB4X5D2U9 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DRB4X5D2U9 AC007923.2-201ENST00000584218 1591 ntBASIC5.46□□□□□ -1.53
HLA-DRB4X5D2U9 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DRB4X5D2U9 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC5.46□□□□□ -1.53
HLA-DRB4X5D2U9 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DRB4X5D2U9 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC5.46□□□□□ -1.53
HLA-DRB4X5D2U9 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
HLA-DRB4X5D2U9 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC097634.1-201ENST00000604491 2467 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 Y_RNA.209-201ENST00000364156 111 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 CNN3P1-201ENST00000401596 935 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 RPS21P8-201ENST00000413365 247 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC009237.9-201ENST00000414800 347 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 PPIAP30-201ENST00000415473 519 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC109638.1-201ENST00000417406 326 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 FTOP1-201ENST00000419363 861 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AL354983.1-201ENST00000434580 906 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC114755.4-201ENST00000439114 443 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 GTF2F2P2-201ENST00000445825 721 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AL591379.2-201ENST00000450223 397 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 ATP5G1P6-201ENST00000451206 412 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC016489.1-201ENST00000461109 375 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 FOLH1B-202ENST00000529567 2145 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 HIGD1AP9-201ENST00000550710 279 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AL365223.1-201ENST00000574864 1297 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 BOLA2P1-201ENST00000584794 232 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC026333.4-201ENST00000613543 544 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 FAM27E3-202ENST00000614611 340 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 PART1_3.1-201ENST00000619680 131 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 uc_338.21-201ENST00000622458 147 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 ENO1P4-201ENST00000416471 1785 ntBASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DRB4X5D2U9 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms