Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 RPL6P24-201ENST00000445338 864 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 RHEBP1-201ENST00000448647 556 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 RN7SL19P-201ENST00000462522 306 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 TDGF1P6-201ENST00000463873 448 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 RN7SL332P-201ENST00000482163 254 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AL445187.1-201ENST00000502685 260 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 GCSHP1-201ENST00000512554 484 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC026688.1-201ENST00000520639 1168 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AP000919.1-201ENST00000582850 985 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC138473.1-201ENST00000605717 526 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
SNX18Q96RF0 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SNX18Q96RF0 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
SNX18Q96RF0 CR383656.5-201ENST00000547616 1340 ntBASIC6.77□□□□□ -1.32
SNX18Q96RF0 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 PABPC1P8-201ENST00000452851 2086 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 MIR575-201ENST00000385013 94 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 RNU2-5P-201ENST00000410533 180 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 RN7SKP89-201ENST00000410774 242 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AC017104.2-201ENST00000417000 321 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AL356806.1-201ENST00000422524 916 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 AC003071.2-201ENST00000423857 315 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 Z83313.1-201ENST00000433780 718 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 XKRYP6-201ENST00000440468 1116 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 XKRYP3-201ENST00000442113 1116 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 RPS2P25-201ENST00000467247 580 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AP004833.1-201ENST00000507987 1238 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AC112206.4-201ENST00000515142 405 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNX18Q96RF0 NPIPP1-203ENST00000547107 1071 ntBASIC6.77□□□□□ -1.33
SNX18Q96RF0 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC6.77□□□□□ -1.33
SNX18Q96RF0 AC013283.1-201ENST00000557282 492 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms