Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 AP003471.1-202ENST00000319051 1988 ntBASIC6.63□□□□□ -1.35
CHD8Q9HCK8 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 MIR323A-201ENST00000362199 86 ntBASIC6.63□□□□□ -1.35
CHD8Q9HCK8 MIR498-201ENST00000385134 124 ntBASIC6.63□□□□□ -1.35
CHD8Q9HCK8 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 IGKV2D-38-201ENST00000518423 240 ntBASIC6.63□□□□□ -1.35
CHD8Q9HCK8 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHD8Q9HCK8 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 CDY19P-201ENST00000411668 1613 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 CDY18P-201ENST00000438294 1609 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 AC104083.1-201ENST00000569449 2615 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 WNK1-220ENST00000574564 1401 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 FXR1-207ENST00000468861 1989 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 GANC-206ENST00000566442 2512 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 RNA5SP77-201ENST00000365394 120 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 DIMT1P1-201ENST00000603970 763 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 AL512329.1-201ENST00000404600 1592 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 LGALS8-219ENST00000526589 6420 ntAPPRIS P4 TSL 5 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 AC125603.4-201ENST00000621942 2699 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 RNA5SP242-201ENST00000364171 118 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 RPL5P7-201ENST00000444235 813 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 DNAJB5P1-201ENST00000454004 806 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 AC010878.1-201ENST00000456500 1047 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 RPL12P31-201ENST00000478433 450 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 ZNF519P4-201ENST00000514008 125 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 AC026458.1-201ENST00000564330 438 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 AC005514.1-201ENST00000623521 208 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 AC129915.3-201ENST00000634128 948 ntBASIC6.62□□□□□ -1.35
CHD8Q9HCK8 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD8Q9HCK8 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 OR2AH1P-202ENST00000641232 2744 ntBASIC6.61□□□□□ -1.35
CHD8Q9HCK8 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 RN7SKP115-201ENST00000363177 317 ntBASIC6.61□□□□□ -1.35
CHD8Q9HCK8 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 AL354794.2-201ENST00000424795 1248 ntBASIC6.61□□□□□ -1.35
CHD8Q9HCK8 TUBB4BP6-201ENST00000437576 479 ntBASIC6.61□□□□□ -1.35
CHD8Q9HCK8 AC092570.2-201ENST00000452117 1143 ntBASIC6.61□□□□□ -1.35
CHD8Q9HCK8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.61□□□□□ -1.35
CHD8Q9HCK8 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms