Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 RNU6-1227P-201ENST00000383981 107 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 RNU6-1200P-201ENST00000384162 107 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 LSM5-202ENST00000409292 538 ntTSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC008173.1-201ENST00000418901 264 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 MTCYBP24-201ENST00000420387 1106 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 GRPEL2P2-201ENST00000421856 670 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 OR8F1P-201ENST00000425243 930 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 LLPHP2-201ENST00000436405 396 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC078845.1-201ENST00000445293 889 ntTSL 5 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 MRPL35P2-201ENST00000448009 511 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 PAXBP1P1-201ENST00000449315 447 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 RPL7P14-201ENST00000449851 741 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 OR9M1P-201ENST00000459641 921 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 RPS14P7-201ENST00000473701 448 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC097522.1-201ENST00000507811 1042 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC022140.1-202ENST00000507887 638 ntTSL 3 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 MTCO1P35-201ENST00000515270 228 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 HNRNPCP8-201ENST00000528764 888 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 RBM4B-207ENST00000531969 769 ntTSL 3 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC005230.1-201ENST00000555418 285 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC060814.2-201ENST00000556905 1089 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AL132640.2-202ENST00000559732 614 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 MIR4789-201ENST00000577469 82 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 MIR4793-201ENST00000577502 87 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 MIR4269-201ENST00000578705 84 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC233702.4-201ENST00000581610 304 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 DUXAP4-201ENST00000603046 613 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AL121917.2-201ENST00000605044 390 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC005377.1-201ENST00000605126 456 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 AC007792.1-201ENST00000623023 402 ntBASIC9.5□□□□□ -0.89
LRCH3Q96II8 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 FLNB-AS1-202ENST00000488720 3709 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 IL24-201ENST00000294984 1701 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
LRCH3Q96II8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 TRIM16L-201ENST00000395671 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
LRCH3Q96II8 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 NCEH1-205ENST00000538775 4315 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 GUCY1A3-208ENST00000511507 2552 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AL121657.1-201ENST00000327215 531 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 RNA5SP426-201ENST00000362901 121 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 ARF1P1-201ENST00000406466 544 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 RANP4-201ENST00000413361 655 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms